G1188535


Basic Information

Item Value
gene id G1188535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 55296100 ~ 55296367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355559
ATAGTGGTAgtcctgatcacagacaacgatgagacagccaatagggaggaggtcagagacctggcattgtggtgccaggtaaacaacaTCTCactcaaagtgatcaagacaaagaagatgattgtggactacaggaaaaggaggaccgagcacgcccccattctcatcgacaggctgtagtggagcaggttgagagcttcaagttctttgtgtccacataaccaacaaactatcatggaccaaacacaccaagacagttgtgaagagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355559 True 268 lncRNA 0.48 1 55296100 55296367

Neighbor

gene id symbol gene type direction distance location
LOC110486846 LOC106601652 coding upstream 355609 54939020 ~ 54940491 (+)
narfl LOC106606697 coding upstream 362678 54925567 ~ 54933422 (+)
LOC110486830 LOC106606695 coding upstream 370659 54907568 ~ 54925441 (+)
LOC110485227 LOC106606653 coding upstream 485972 54755882 ~ 54810128 (+)
LOC110486811 LOC106601768 coding upstream 564735 54720661 ~ 54731365 (+)
LOC110539040 LOC106601832 coding downstream 44335 55340702 ~ 55394765 (+)
LOC110538788 bri3 coding downstream 128498 55424865 ~ 56123584 (+)
LOC110538766 LOC105013005 coding downstream 537744 55834111 ~ 55915904 (+)
LOC110485236 LOC106606588 coding downstream 739273 56035640 ~ 56088193 (+)
LOC110486855 bri3 coding downstream 817796 56114163 ~ 56121445 (+)
G1188534 NA non-coding upstream 1254 55294581 ~ 55294846 (+)
G1188499 aimp2 non-coding upstream 2710 55289151 ~ 55293390 (+)
G1188500 NA non-coding upstream 7155 55288554 ~ 55288945 (+)
G1188495 NA non-coding upstream 89687 55205814 ~ 55206413 (+)
G1188488 NA non-coding upstream 94863 55200913 ~ 55201237 (+)
G1188540 NA non-coding downstream 15961 55312328 ~ 55313291 (+)
G1188543 NA non-coding downstream 22659 55319026 ~ 55319241 (+)
G1188544 NA non-coding downstream 22953 55319320 ~ 55325384 (+)
G1188571 NA non-coding downstream 73132 55369499 ~ 55369729 (+)
G1188584 LOC106601830 non-coding downstream 112898 55409265 ~ 55414178 (+)
G1188386 NA other upstream 173481 55121261 ~ 55122619 (+)
G1188344 NA other upstream 298805 54993674 ~ 54997295 (+)
axin2 LOC105026129 other upstream 995787 54272638 ~ 54300365 (+)
G1187390 NA other upstream 1031072 54264066 ~ 54265028 (+)
G1187452 NA other upstream 1098085 54188567 ~ 54198015 (+)
G1189040 NA other downstream 642105 55938472 ~ 55939357 (+)
G1189738 NA other downstream 1540049 56836416 ~ 56836996 (+)
G1189675 srebf1 other downstream 1581561 56877928 ~ 56925607 (+)
G1189819 NA other downstream 1758086 57054453 ~ 57055617 (+)

Expression


Co-expression Network