Gene
RNA
| Item | Value |
|---|---|
| gene id | G1188717 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 55372199 ~ 55372529 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1355783 | True | 331 | lncRNA | 0.39 | 1 | 55372199 | 55372529 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936431 | LOC106601789 | coding | downstream | 30348 | 55334459 ~ 55341851 (-) |
| pvalb1 | pvalb1 | coding | downstream | 47889 | 55321599 ~ 55324310 (-) |
| LOC110486849 | LOC106601824 | coding | downstream | 55465 | 55312290 ~ 55316734 (-) |
| aimp2 | aimp2 | coding | downstream | 78768 | 55289150 ~ 55293431 (-) |
| LOC110486847 | LOC106606650 | coding | downstream | 95528 | 55254697 ~ 55276671 (-) |
| LOC110519575 | LOC106606659 | coding | upstream | 22335 | 55394864 ~ 55419061 (-) |
| LOC110485238 | LOC106601829 | coding | upstream | 62607 | 55434816 ~ 55509918 (-) |
| LOC110538789 | LOC106606674 | coding | upstream | 160718 | 55533247 ~ 55574537 (-) |
| LOC110486851 | LOC106606669 | coding | upstream | 656892 | 56029421 ~ 56036822 (-) |
| LOC110485237 | LOC106606659 | coding | upstream | 715763 | 56088292 ~ 56110984 (-) |
| G1188696 | NA | non-coding | downstream | 31833 | 55339773 ~ 55340366 (-) |
| G1188693 | NA | non-coding | downstream | 44845 | 55327073 ~ 55327354 (-) |
| G1188675 | NA | non-coding | downstream | 67313 | 55304637 ~ 55304886 (-) |
| G1188669 | NA | non-coding | downstream | 83985 | 55284446 ~ 55288214 (-) |
| G1188638 | NA | non-coding | downstream | 117717 | 55243545 ~ 55254482 (-) |
| G1188682 | NA | non-coding | upstream | 57205 | 55429734 ~ 55432178 (-) |
| G1188744 | NA | non-coding | upstream | 144661 | 55517190 ~ 55517458 (-) |
| G1188752 | NA | non-coding | upstream | 150410 | 55522939 ~ 55523269 (-) |
| G1188831 | NA | non-coding | upstream | 247128 | 55619657 ~ 55620056 (-) |
| LOC110516592 | LOC106601772 | other | downstream | 159484 | 55209614 ~ 55242150 (-) |
| LOC110486836 | LOC106606701 | other | downstream | 345751 | 55022619 ~ 55026465 (-) |
| LOC110485228 | LOC106606689 | other | downstream | 540877 | 54813122 ~ 54831352 (-) |
| LOC110486825 | LOC106606691 | other | downstream | 623541 | 54741479 ~ 54748709 (-) |
| G1188186 | LOC106588841 | other | downstream | 771750 | 54599401 ~ 54600449 (-) |
| G1189279 | LOC106601786 | other | upstream | 539695 | 55912224 ~ 55915885 (-) |
| G1189660 | LOC106601786 | other | upstream | 1297764 | 56670293 ~ 56674238 (-) |
| LOC110486894 | LOC106601810 | other | upstream | 1708288 | 57054453 ~ 57085521 (-) |
