G1188817


Basic Information

Item Value
gene id G1188817
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 55607303 ~ 55607553 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355896
ctatgtTTTGtccagatgaatgtggtaccttcaggcttttggaaattgctcccaaggatgaaccagacttgtggaggtctacaattttttttctgaggtattggctgatttcttttgattttcccatgatgtcaagcaaagaggcactgagtttgaaggtaggccttgaaatacatccacaggtacacatccaattgactcaaatgatgtcaattagcctatcagaagattctaaagccattacataattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355896 True 251 lncRNA 0.39 1 55607303 55607553

Neighbor

gene id symbol gene type direction distance location
LOC110539040 LOC106601832 coding upstream 212538 55340702 ~ 55394765 (+)
LOC110486846 LOC106601652 coding upstream 666812 54939020 ~ 54940491 (+)
narfl LOC106606697 coding upstream 673881 54925567 ~ 54933422 (+)
LOC110486830 LOC106606695 coding upstream 681862 54907568 ~ 54925441 (+)
LOC110485227 LOC106606653 coding upstream 797175 54755882 ~ 54810128 (+)
LOC110538766 LOC105013005 coding downstream 226558 55834111 ~ 55915904 (+)
LOC110485236 LOC106606588 coding downstream 428087 56035640 ~ 56088193 (+)
LOC110486855 bri3 coding downstream 506610 56114163 ~ 56121445 (+)
LOC110538765 LOC105013005 coding downstream 989068 56596621 ~ 56674315 (+)
LOC118938096 NA coding downstream 1071049 56678602 ~ 56679864 (+)
G1188801 NA non-coding upstream 24578 55582036 ~ 55582725 (+)
G1188756 NA non-coding upstream 81323 55525658 ~ 55525980 (+)
G1188743 NA non-coding upstream 89770 55517305 ~ 55517533 (+)
G1188620 NA non-coding upstream 112145 55494787 ~ 55495158 (+)
LOC110538788 bri3 non-coding upstream 173892 55424865 ~ 56123584 (+)
G1188830 NA non-coding downstream 11798 55619351 ~ 55619562 (+)
G1188943 NA non-coding downstream 140388 55747941 ~ 56126644 (+)
G1188946 NA non-coding downstream 145734 55753287 ~ 55753576 (+)
G1188996 NA non-coding downstream 235239 55842792 ~ 55843178 (+)
G1189027 NA non-coding downstream 296242 55903795 ~ 55904957 (+)
G1188386 NA other upstream 484684 55121261 ~ 55122619 (+)
G1188344 NA other upstream 610008 54993674 ~ 54997295 (+)
axin2 LOC105026129 other upstream 1306990 54272638 ~ 54300365 (+)
G1187390 NA other upstream 1342275 54264066 ~ 54265028 (+)
G1189040 NA other downstream 330919 55938472 ~ 55939357 (+)
G1189738 NA other downstream 1228863 56836416 ~ 56836996 (+)
G1189675 srebf1 other downstream 1270375 56877928 ~ 56925607 (+)
G1189819 NA other downstream 1446900 57054453 ~ 57055617 (+)
LOC110514101 LOC106606600 other downstream 1988467 57522756 ~ 57640558 (+)

Expression


Co-expression Network