Gene
RNA
| Item | Value |
|---|---|
| gene id | G1188946 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 55753287 ~ 55753576 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1356055 | True | 270 | lncRNA | 0.36 | 2 | 55753287 | 55753576 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539040 | LOC106601832 | coding | upstream | 358522 | 55340702 ~ 55394765 (+) |
| LOC110486846 | LOC106601652 | coding | upstream | 812796 | 54939020 ~ 54940491 (+) |
| narfl | LOC106606697 | coding | upstream | 819865 | 54925567 ~ 54933422 (+) |
| LOC110486830 | LOC106606695 | coding | upstream | 827846 | 54907568 ~ 54925441 (+) |
| LOC110485227 | LOC106606653 | coding | upstream | 943159 | 54755882 ~ 54810128 (+) |
| LOC110538766 | LOC105013005 | coding | downstream | 80535 | 55834111 ~ 55915904 (+) |
| LOC110485236 | LOC106606588 | coding | downstream | 282064 | 56035640 ~ 56088193 (+) |
| LOC110486855 | bri3 | coding | downstream | 360587 | 56114163 ~ 56121445 (+) |
| LOC110538765 | LOC105013005 | coding | downstream | 843045 | 56596621 ~ 56674315 (+) |
| LOC118938096 | NA | coding | downstream | 925026 | 56678602 ~ 56679864 (+) |
| G1188830 | NA | non-coding | upstream | 133725 | 55619351 ~ 55619562 (+) |
| G1188817 | NA | non-coding | upstream | 145734 | 55607303 ~ 55607553 (+) |
| G1188801 | NA | non-coding | upstream | 170562 | 55582036 ~ 55582725 (+) |
| G1188756 | NA | non-coding | upstream | 227307 | 55525658 ~ 55525980 (+) |
| G1188743 | NA | non-coding | upstream | 235754 | 55517305 ~ 55517533 (+) |
| G1188996 | NA | non-coding | downstream | 89216 | 55842792 ~ 55843178 (+) |
| G1189027 | NA | non-coding | downstream | 150219 | 55903795 ~ 55904957 (+) |
| G1189042 | NA | non-coding | downstream | 194122 | 55947698 ~ 55958296 (+) |
| G1189044 | NA | non-coding | downstream | 201609 | 55955185 ~ 56024767 (+) |
| G1189054 | NA | non-coding | downstream | 232053 | 55985629 ~ 56026601 (+) |
| G1188386 | NA | other | upstream | 630668 | 55121261 ~ 55122619 (+) |
| G1188344 | NA | other | upstream | 755992 | 54993674 ~ 54997295 (+) |
| axin2 | LOC105026129 | other | upstream | 1452974 | 54272638 ~ 54300365 (+) |
| G1187390 | NA | other | upstream | 1488259 | 54264066 ~ 54265028 (+) |
| G1189040 | NA | other | downstream | 184896 | 55938472 ~ 55939357 (+) |
| G1189738 | NA | other | downstream | 1082840 | 56836416 ~ 56836996 (+) |
| G1189675 | srebf1 | other | downstream | 1124352 | 56877928 ~ 56925607 (+) |
| G1189819 | NA | other | downstream | 1300877 | 57054453 ~ 57055617 (+) |
| LOC110514101 | LOC106606600 | other | downstream | 1842444 | 57522756 ~ 57640558 (+) |
