Gene
RNA
| Item | Value |
|---|---|
| gene id | G1189058 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 56010936 ~ 56023484 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1356186 | False | 821 | lncRNA | 0.42 | 2 | 56010936 | 56019462 |
| TU1356189 | True | 1066 | lncRNA | 0.42 | 3 | 56010936 | 56023484 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538766 | LOC105013005 | coding | upstream | 95032 | 55834111 ~ 55915904 (+) |
| LOC110539040 | LOC106601832 | coding | upstream | 616171 | 55340702 ~ 55394765 (+) |
| LOC110486846 | LOC106601652 | coding | upstream | 1070445 | 54939020 ~ 54940491 (+) |
| narfl | LOC106606697 | coding | upstream | 1077514 | 54925567 ~ 54933422 (+) |
| LOC110486830 | LOC106606695 | coding | upstream | 1085495 | 54907568 ~ 54925441 (+) |
| LOC110485236 | LOC106606588 | coding | downstream | 12156 | 56035640 ~ 56088193 (+) |
| LOC110486855 | bri3 | coding | downstream | 90679 | 56114163 ~ 56121445 (+) |
| LOC110538765 | LOC105013005 | coding | downstream | 573137 | 56596621 ~ 56674315 (+) |
| LOC118938096 | NA | coding | downstream | 655118 | 56678602 ~ 56679864 (+) |
| LOC118938331 | LOC106606599 | coding | downstream | 665099 | 56688583 ~ 56926185 (+) |
| G1189057 | NA | non-coding | upstream | 7965 | 55999436 ~ 56002971 (+) |
| G1189042 | NA | non-coding | upstream | 52640 | 55947698 ~ 55958296 (+) |
| G1189027 | NA | non-coding | upstream | 105979 | 55903795 ~ 55904957 (+) |
| G1188996 | NA | non-coding | upstream | 167758 | 55842792 ~ 55843178 (+) |
| G1188946 | NA | non-coding | upstream | 257360 | 55753287 ~ 55753576 (+) |
| G1189092 | NA | non-coding | downstream | 97743 | 56121227 ~ 56123750 (+) |
| G1189112 | NA | non-coding | downstream | 124158 | 56147642 ~ 56148404 (+) |
| G1189093 | NA | non-coding | downstream | 137347 | 56160831 ~ 56161860 (+) |
| G1189128 | NA | non-coding | downstream | 154713 | 56178197 ~ 56179439 (+) |
| G1189040 | NA | other | upstream | 71579 | 55938472 ~ 55939357 (+) |
| G1188386 | NA | other | upstream | 888317 | 55121261 ~ 55122619 (+) |
| G1188344 | NA | other | upstream | 1013641 | 54993674 ~ 54997295 (+) |
| axin2 | LOC105026129 | other | upstream | 1710623 | 54272638 ~ 54300365 (+) |
| G1189738 | NA | other | downstream | 812932 | 56836416 ~ 56836996 (+) |
| G1189675 | srebf1 | other | downstream | 854444 | 56877928 ~ 56925607 (+) |
| G1189819 | NA | other | downstream | 1030969 | 57054453 ~ 57055617 (+) |
| LOC110514101 | LOC106606600 | other | downstream | 1572536 | 57522756 ~ 57640558 (+) |
| LOC110486909 | LOC106601794 | other | downstream | 1600189 | 57613961 ~ 57625405 (+) |
