Item | Value |
---|---|
gene id | G1189092 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048577.1 |
NCBI id | CM023231.2 |
chromosome length | 73332040 |
location | 56121227 ~ 56123750 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU1356227 | False | 2501 | lncRNA | 0.43 | 2 | 56121227 | 56123750 |
TU1356228 | False | 2478 | lncRNA | 0.43 | 2 | 56121227 | 56123750 |
TU1356229 | False | 2400 | lncRNA | 0.42 | 2 | 56121227 | 56123750 |
TU1356231 | False | 2296 | lncRNA | 0.42 | 3 | 56121227 | 56123750 |
TU1356232 | False | 2319 | lncRNA | 0.42 | 3 | 56121227 | 56123750 |
TU1356234 | False | 2377 | lncRNA | 0.42 | 2 | 56121227 | 56123750 |
TU1356235 | False | 2455 | lncRNA | 0.43 | 3 | 56121227 | 56123750 |
TU1356236 | False | 2296 | lncRNA | 0.42 | 3 | 56121227 | 56123750 |
TU1356237 | False | 2342 | lncRNA | 0.42 | 2 | 56121227 | 56123750 |
TU1356238 | False | 2273 | lncRNA | 0.41 | 3 | 56121227 | 56123750 |
TU1356239 | True | 2273 | lncRNA | 0.41 | 3 | 56121227 | 56123750 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110485236 | LOC106606588 | coding | upstream | 33034 | 56035640 ~ 56088193 (+) |
LOC110538766 | LOC105013005 | coding | upstream | 205323 | 55834111 ~ 55915904 (+) |
LOC110539040 | LOC106601832 | coding | upstream | 726462 | 55340702 ~ 55394765 (+) |
LOC110486846 | LOC106601652 | coding | upstream | 1180736 | 54939020 ~ 54940491 (+) |
narfl | LOC106606697 | coding | upstream | 1187805 | 54925567 ~ 54933422 (+) |
LOC110538765 | LOC105013005 | coding | downstream | 472871 | 56596621 ~ 56674315 (+) |
LOC118938096 | NA | coding | downstream | 554852 | 56678602 ~ 56679864 (+) |
LOC118938331 | LOC106606599 | coding | downstream | 564833 | 56688583 ~ 56926185 (+) |
LOC110486865 | NA | coding | downstream | 836848 | 56960598 ~ 56963017 (+) |
LOC110517037 | drc3 | coding | downstream | 884250 | 57008000 ~ 57019247 (+) |
G1189054 | NA | non-coding | upstream | 94626 | 55985629 ~ 56026601 (+) |
G1189044 | NA | non-coding | upstream | 96460 | 55955185 ~ 56024767 (+) |
G1189058 | NA | non-coding | upstream | 97743 | 56010936 ~ 56023484 (+) |
G1189060 | NA | non-coding | upstream | 103177 | 56013064 ~ 56018050 (+) |
G1189112 | NA | non-coding | downstream | 23892 | 56147642 ~ 56148404 (+) |
G1189093 | NA | non-coding | downstream | 37081 | 56160831 ~ 56161860 (+) |
G1189128 | NA | non-coding | downstream | 54447 | 56178197 ~ 56179439 (+) |
G1189134 | NA | non-coding | downstream | 70923 | 56194673 ~ 56195341 (+) |
G1189182 | NA | non-coding | downstream | 178405 | 56302155 ~ 56303161 (+) |
G1189040 | NA | other | upstream | 181870 | 55938472 ~ 55939357 (+) |
G1188386 | NA | other | upstream | 998608 | 55121261 ~ 55122619 (+) |
G1188344 | NA | other | upstream | 1123932 | 54993674 ~ 54997295 (+) |
axin2 | LOC105026129 | other | upstream | 1820914 | 54272638 ~ 54300365 (+) |
G1189738 | NA | other | downstream | 712666 | 56836416 ~ 56836996 (+) |
G1189675 | srebf1 | other | downstream | 754178 | 56877928 ~ 56925607 (+) |
G1189819 | NA | other | downstream | 930703 | 57054453 ~ 57055617 (+) |
LOC110514101 | LOC106606600 | other | downstream | 1472270 | 57522756 ~ 57640558 (+) |
LOC110486909 | LOC106601794 | other | downstream | 1499923 | 57613961 ~ 57625405 (+) |