G1189093


Basic Information

Item Value
gene id G1189093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 56160831 ~ 56161860 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1356240
cacacacaccttgcagaACCCACACGCACACCTTGCAGAACACACGCACGCAAAcgcacagacacatagacagagacagtacTCACATTCTCCTCTAGCTCAAGGTGAACTTTCCTGTGGACCTCGGATATCTCCATCAGCACAACGCCTGTGGCGAGAGAGAAACATGCACTGATTGGCTGCTTGGCTCGTGGGGGAAAACAAGATTAGGGTTTTGGTCAGATTATCTacccttctcctgaagtgtgcactattTGACATATCTacccttctcctgaagtgtgcactattTGACATATCTACTCTTCTGCTGAAGTGTGCACTATTTGACATATTATCTacccttctcctgaagtgtgcactattTGACATATCTACTCTTCTGCTGAAGTGTGCACTATTTGACATATTATCTacccttctcctgaagtgtgcactattTGACATATCTACTCTTCTGCTGAAGTGTGCACTATTTGACATATTATCTacccttctcctgaagtgtgcactattTGACATATCTACtcttctcctgaagtgtgcactattTGACATATCTACtcttctcctgaagtgtgcactattTGACATATTATCTACtcttctcctgaagtgtgcactatttgacatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccagttaaaaagatgagagaggcctgtaattttcatcataggtacacttcaactatgacagacaaaatgagaaaaaaaaaatctagaaaatcacattgtaggatttttaatgaatttatttgcaaattatggtggaaaaaaagtatttggtcaataacaaaagtttctcaatactttgttatataccctttgttggcaatgacagaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1356240 True 955 lncRNA 0.40 2 56160831 56161860

Neighbor

gene id symbol gene type direction distance location
LOC110538788 bri3 coding upstream 37247 55424865 ~ 56123584 (+)
LOC110486855 bri3 coding upstream 39386 56114163 ~ 56121445 (+)
LOC110485236 LOC106606588 coding upstream 72638 56035640 ~ 56088193 (+)
LOC110538766 LOC105013005 coding upstream 244927 55834111 ~ 55915904 (+)
LOC110539040 LOC106601832 coding upstream 766066 55340702 ~ 55394765 (+)
LOC110538765 LOC105013005 coding downstream 434761 56596621 ~ 56674315 (+)
LOC118938096 NA coding downstream 516742 56678602 ~ 56679864 (+)
LOC118938331 LOC106606599 coding downstream 526723 56688583 ~ 56926185 (+)
LOC110486865 NA coding downstream 798738 56960598 ~ 56963017 (+)
LOC110517037 drc3 coding downstream 846140 57008000 ~ 57019247 (+)
G1189112 NA non-coding upstream 12427 56147642 ~ 56148404 (+)
G1188943 NA non-coding upstream 34187 55747941 ~ 56126644 (+)
G1189092 NA non-coding upstream 37081 56121227 ~ 56123750 (+)
G1189054 NA non-coding upstream 134230 55985629 ~ 56026601 (+)
G1189128 NA non-coding downstream 16337 56178197 ~ 56179439 (+)
G1189134 NA non-coding downstream 32813 56194673 ~ 56195341 (+)
G1189182 NA non-coding downstream 140295 56302155 ~ 56303161 (+)
G1189405 NA non-coding downstream 188222 56350082 ~ 56351587 (+)
G1189423 NA non-coding downstream 219849 56381709 ~ 56382252 (+)
G1189040 NA other upstream 221474 55938472 ~ 55939357 (+)
G1188386 NA other upstream 1038212 55121261 ~ 55122619 (+)
G1188344 NA other upstream 1163536 54993674 ~ 54997295 (+)
axin2 LOC105026129 other upstream 1860518 54272638 ~ 54300365 (+)
G1189738 NA other downstream 674556 56836416 ~ 56836996 (+)
G1189675 srebf1 other downstream 716068 56877928 ~ 56925607 (+)
G1189819 NA other downstream 892593 57054453 ~ 57055617 (+)
LOC110514101 LOC106606600 other downstream 1434160 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other downstream 1461813 57613961 ~ 57625405 (+)

Expression


Co-expression Network