Gene
RNA
| Item | Value |
|---|---|
| gene id | G1189182 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 56302155 ~ 56303161 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1356352 | True | 304 | lncRNA | 0.36 | 2 | 56302155 | 56303161 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538788 | bri3 | coding | upstream | 178571 | 55424865 ~ 56123584 (+) |
| LOC110486855 | bri3 | coding | upstream | 180710 | 56114163 ~ 56121445 (+) |
| LOC110485236 | LOC106606588 | coding | upstream | 213962 | 56035640 ~ 56088193 (+) |
| LOC110538766 | LOC105013005 | coding | upstream | 386251 | 55834111 ~ 55915904 (+) |
| LOC110539040 | LOC106601832 | coding | upstream | 907390 | 55340702 ~ 55394765 (+) |
| LOC110538765 | LOC105013005 | coding | downstream | 293460 | 56596621 ~ 56674315 (+) |
| LOC118938096 | NA | coding | downstream | 375441 | 56678602 ~ 56679864 (+) |
| LOC118938331 | LOC106606599 | coding | downstream | 385422 | 56688583 ~ 56926185 (+) |
| LOC110486865 | NA | coding | downstream | 657437 | 56960598 ~ 56963017 (+) |
| LOC110517037 | drc3 | coding | downstream | 704839 | 57008000 ~ 57019247 (+) |
| G1189134 | NA | non-coding | upstream | 106814 | 56194673 ~ 56195341 (+) |
| G1189128 | NA | non-coding | upstream | 122716 | 56178197 ~ 56179439 (+) |
| G1189093 | NA | non-coding | upstream | 140295 | 56160831 ~ 56161860 (+) |
| G1189112 | NA | non-coding | upstream | 153751 | 56147642 ~ 56148404 (+) |
| G1189092 | NA | non-coding | upstream | 178405 | 56121227 ~ 56123750 (+) |
| G1189405 | NA | non-coding | downstream | 46921 | 56350082 ~ 56351587 (+) |
| G1189423 | NA | non-coding | downstream | 78548 | 56381709 ~ 56382252 (+) |
| G1189430 | NA | non-coding | downstream | 87826 | 56390987 ~ 56391290 (+) |
| G1189432 | NA | non-coding | downstream | 88556 | 56391717 ~ 56392440 (+) |
| G1189434 | NA | non-coding | downstream | 92725 | 56395886 ~ 56396185 (+) |
| G1189040 | NA | other | upstream | 362798 | 55938472 ~ 55939357 (+) |
| G1188386 | NA | other | upstream | 1179536 | 55121261 ~ 55122619 (+) |
| G1188344 | NA | other | upstream | 1304860 | 54993674 ~ 54997295 (+) |
| axin2 | LOC105026129 | other | upstream | 2001842 | 54272638 ~ 54300365 (+) |
| G1189738 | NA | other | downstream | 533255 | 56836416 ~ 56836996 (+) |
| G1189675 | srebf1 | other | downstream | 574767 | 56877928 ~ 56925607 (+) |
| G1189819 | NA | other | downstream | 751292 | 57054453 ~ 57055617 (+) |
| LOC110514101 | LOC106606600 | other | downstream | 1292859 | 57522756 ~ 57640558 (+) |
| LOC110486909 | LOC106601794 | other | downstream | 1320512 | 57613961 ~ 57625405 (+) |
