G1189423


Basic Information

Item Value
gene id G1189423
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 56381709 ~ 56382252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1356627
gccctgcaatgccaagagctgagcaaagaaaatagtcccctcatccagctggtcctggggctgagttcacaaacctgttctactaacacactgaagcctcaggaccagaacatccaatcaatcagaataaaccaaattacacaGAGTCCAAACAAAACGAcgttgcttattgggaaacacaagcacaaacaaagcaaaatgcagtgcttcTTGGCCCTAAATGGACTGTACACCGTGGCTAACtgtttgaccatggttactgatcaaaaccttagaaaaaccttgacaaagtacaggctcagtgagcacagccttgccattgagaagggtagacacaggaaaacctggctccctgtagaggaaaggctgtgcaaccactgcaacacagcagaacctggctccctgtagaggaaaggctgtgcaaccactgcaacacagcagaacctggctccctgtagaggaaaggctgtgaaaccactgcacaacagcagaacctggctccctgtagaggaaaggctgtgcaaccactgcaccacagcagaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1356627 True 544 lncRNA 0.49 1 56381709 56382252

Neighbor

gene id symbol gene type direction distance location
LOC110538788 bri3 coding upstream 258125 55424865 ~ 56123584 (+)
LOC110486855 bri3 coding upstream 260264 56114163 ~ 56121445 (+)
LOC110485236 LOC106606588 coding upstream 293516 56035640 ~ 56088193 (+)
LOC110538766 LOC105013005 coding upstream 465805 55834111 ~ 55915904 (+)
LOC110539040 LOC106601832 coding upstream 986944 55340702 ~ 55394765 (+)
LOC110538765 LOC105013005 coding downstream 214369 56596621 ~ 56674315 (+)
LOC118938096 NA coding downstream 296350 56678602 ~ 56679864 (+)
LOC118938331 LOC106606599 coding downstream 306331 56688583 ~ 56926185 (+)
LOC110486865 NA coding downstream 578346 56960598 ~ 56963017 (+)
LOC110517037 drc3 coding downstream 625748 57008000 ~ 57019247 (+)
G1189405 NA non-coding upstream 30122 56350082 ~ 56351587 (+)
G1189182 NA non-coding upstream 78548 56302155 ~ 56303161 (+)
G1189134 NA non-coding upstream 186368 56194673 ~ 56195341 (+)
G1189128 NA non-coding upstream 202270 56178197 ~ 56179439 (+)
G1189093 NA non-coding upstream 219849 56160831 ~ 56161860 (+)
G1189430 NA non-coding downstream 8735 56390987 ~ 56391290 (+)
G1189432 NA non-coding downstream 9465 56391717 ~ 56392440 (+)
G1189434 NA non-coding downstream 13634 56395886 ~ 56396185 (+)
G1189436 NA non-coding downstream 15349 56397601 ~ 56397915 (+)
G1189439 NA non-coding downstream 22975 56405227 ~ 56405480 (+)
G1189040 NA other upstream 442352 55938472 ~ 55939357 (+)
G1188386 NA other upstream 1259090 55121261 ~ 55122619 (+)
G1188344 NA other upstream 1384414 54993674 ~ 54997295 (+)
axin2 LOC105026129 other upstream 2081396 54272638 ~ 54300365 (+)
G1189738 NA other downstream 454164 56836416 ~ 56836996 (+)
G1189675 srebf1 other downstream 495676 56877928 ~ 56925607 (+)
G1189819 NA other downstream 672201 57054453 ~ 57055617 (+)
LOC110514101 LOC106606600 other downstream 1213768 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other downstream 1241421 57613961 ~ 57625405 (+)

Expression


Co-expression Network