Gene
RNA
| Item | Value |
|---|---|
| gene id | G1189432 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 56391717 ~ 56392440 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1356642 | True | 220 | lncRNA | 0.44 | 2 | 56391717 | 56392440 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538788 | bri3 | coding | upstream | 268133 | 55424865 ~ 56123584 (+) |
| LOC110486855 | bri3 | coding | upstream | 270272 | 56114163 ~ 56121445 (+) |
| LOC110485236 | LOC106606588 | coding | upstream | 303524 | 56035640 ~ 56088193 (+) |
| LOC110538766 | LOC105013005 | coding | upstream | 475813 | 55834111 ~ 55915904 (+) |
| LOC110539040 | LOC106601832 | coding | upstream | 996952 | 55340702 ~ 55394765 (+) |
| LOC110538765 | LOC105013005 | coding | downstream | 204181 | 56596621 ~ 56674315 (+) |
| LOC118938096 | NA | coding | downstream | 286162 | 56678602 ~ 56679864 (+) |
| LOC118938331 | LOC106606599 | coding | downstream | 296143 | 56688583 ~ 56926185 (+) |
| LOC110486865 | NA | coding | downstream | 568158 | 56960598 ~ 56963017 (+) |
| LOC110517037 | drc3 | coding | downstream | 615560 | 57008000 ~ 57019247 (+) |
| G1189430 | NA | non-coding | upstream | 427 | 56390987 ~ 56391290 (+) |
| G1189423 | NA | non-coding | upstream | 9465 | 56381709 ~ 56382252 (+) |
| G1189405 | NA | non-coding | upstream | 40130 | 56350082 ~ 56351587 (+) |
| G1189182 | NA | non-coding | upstream | 88556 | 56302155 ~ 56303161 (+) |
| G1189134 | NA | non-coding | upstream | 196376 | 56194673 ~ 56195341 (+) |
| G1189434 | NA | non-coding | downstream | 3446 | 56395886 ~ 56396185 (+) |
| G1189436 | NA | non-coding | downstream | 5161 | 56397601 ~ 56397915 (+) |
| G1189439 | NA | non-coding | downstream | 12787 | 56405227 ~ 56405480 (+) |
| G1189442 | NA | non-coding | downstream | 15996 | 56408436 ~ 56408734 (+) |
| G1189487 | NA | non-coding | downstream | 50293 | 56442733 ~ 56443057 (+) |
| G1189040 | NA | other | upstream | 452360 | 55938472 ~ 55939357 (+) |
| G1188386 | NA | other | upstream | 1269098 | 55121261 ~ 55122619 (+) |
| G1188344 | NA | other | upstream | 1394422 | 54993674 ~ 54997295 (+) |
| axin2 | LOC105026129 | other | upstream | 2091404 | 54272638 ~ 54300365 (+) |
| G1189738 | NA | other | downstream | 443976 | 56836416 ~ 56836996 (+) |
| G1189675 | srebf1 | other | downstream | 485488 | 56877928 ~ 56925607 (+) |
| G1189819 | NA | other | downstream | 662013 | 57054453 ~ 57055617 (+) |
| LOC110514101 | LOC106606600 | other | downstream | 1203580 | 57522756 ~ 57640558 (+) |
| LOC110486909 | LOC106601794 | other | downstream | 1231233 | 57613961 ~ 57625405 (+) |
