G1189434


Basic Information

Item Value
gene id G1189434
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 56395886 ~ 56396185 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1356644
cacgctctctctctctcacgctctcactctttctctctctctttcgctctctcactttctctcacgctctttctctctttcttgctctctctttctctctctcttttctatctctctctctctctctctctctctctctctctctctctctctcctactctctctctcaatttttctctcacactctttctctctttctttctctctctcgctctctctctctttctctctctctctctcttttcctctctctctttctctctctctctctctctcttttttttgttgattAATTTGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1356644 True 300 lncRNA 0.43 1 56395886 56396185

Neighbor

gene id symbol gene type direction distance location
LOC110538788 bri3 coding upstream 272302 55424865 ~ 56123584 (+)
LOC110486855 bri3 coding upstream 274441 56114163 ~ 56121445 (+)
LOC110485236 LOC106606588 coding upstream 307693 56035640 ~ 56088193 (+)
LOC110538766 LOC105013005 coding upstream 479982 55834111 ~ 55915904 (+)
LOC110539040 LOC106601832 coding upstream 1001121 55340702 ~ 55394765 (+)
LOC110538765 LOC105013005 coding downstream 200436 56596621 ~ 56674315 (+)
LOC118938096 NA coding downstream 282417 56678602 ~ 56679864 (+)
LOC118938331 LOC106606599 coding downstream 292398 56688583 ~ 56926185 (+)
LOC110486865 NA coding downstream 564413 56960598 ~ 56963017 (+)
LOC110517037 drc3 coding downstream 611815 57008000 ~ 57019247 (+)
G1189432 NA non-coding upstream 3446 56391717 ~ 56392440 (+)
G1189430 NA non-coding upstream 4596 56390987 ~ 56391290 (+)
G1189423 NA non-coding upstream 13634 56381709 ~ 56382252 (+)
G1189405 NA non-coding upstream 44299 56350082 ~ 56351587 (+)
G1189182 NA non-coding upstream 92725 56302155 ~ 56303161 (+)
G1189436 NA non-coding downstream 1416 56397601 ~ 56397915 (+)
G1189439 NA non-coding downstream 9042 56405227 ~ 56405480 (+)
G1189442 NA non-coding downstream 12251 56408436 ~ 56408734 (+)
G1189487 NA non-coding downstream 46548 56442733 ~ 56443057 (+)
G1189499 NA non-coding downstream 97620 56493805 ~ 56494286 (+)
G1189040 NA other upstream 456529 55938472 ~ 55939357 (+)
G1188386 NA other upstream 1273267 55121261 ~ 55122619 (+)
G1188344 NA other upstream 1398591 54993674 ~ 54997295 (+)
axin2 LOC105026129 other upstream 2095573 54272638 ~ 54300365 (+)
G1189738 NA other downstream 440231 56836416 ~ 56836996 (+)
G1189675 srebf1 other downstream 481743 56877928 ~ 56925607 (+)
G1189819 NA other downstream 658268 57054453 ~ 57055617 (+)
LOC110514101 LOC106606600 other downstream 1199835 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other downstream 1227488 57613961 ~ 57625405 (+)

Expression


Co-expression Network