Gene
RNA
| Item | Value |
|---|---|
| gene id | G1189487 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 56442733 ~ 56443057 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1356700 | True | 224 | lncRNA | 0.40 | 2 | 56442733 | 56443057 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538788 | bri3 | coding | upstream | 319149 | 55424865 ~ 56123584 (+) |
| LOC110486855 | bri3 | coding | upstream | 321288 | 56114163 ~ 56121445 (+) |
| LOC110485236 | LOC106606588 | coding | upstream | 354540 | 56035640 ~ 56088193 (+) |
| LOC110538766 | LOC105013005 | coding | upstream | 526829 | 55834111 ~ 55915904 (+) |
| LOC110539040 | LOC106601832 | coding | upstream | 1047968 | 55340702 ~ 55394765 (+) |
| LOC110538765 | LOC105013005 | coding | downstream | 153564 | 56596621 ~ 56674315 (+) |
| LOC118938096 | NA | coding | downstream | 235545 | 56678602 ~ 56679864 (+) |
| LOC118938331 | LOC106606599 | coding | downstream | 245526 | 56688583 ~ 56926185 (+) |
| LOC110486865 | NA | coding | downstream | 517541 | 56960598 ~ 56963017 (+) |
| LOC110517037 | drc3 | coding | downstream | 564943 | 57008000 ~ 57019247 (+) |
| G1189442 | NA | non-coding | upstream | 33999 | 56408436 ~ 56408734 (+) |
| G1189439 | NA | non-coding | upstream | 37253 | 56405227 ~ 56405480 (+) |
| G1189436 | NA | non-coding | upstream | 44818 | 56397601 ~ 56397915 (+) |
| G1189434 | NA | non-coding | upstream | 46548 | 56395886 ~ 56396185 (+) |
| G1189432 | NA | non-coding | upstream | 50293 | 56391717 ~ 56392440 (+) |
| G1189499 | NA | non-coding | downstream | 50748 | 56493805 ~ 56494286 (+) |
| G1189598 | NA | non-coding | downstream | 205516 | 56648573 ~ 56650112 (+) |
| G1189607 | NA | non-coding | downstream | 219611 | 56662668 ~ 56663270 (+) |
| G1189668 | NA | non-coding | downstream | 239419 | 56682476 ~ 56682882 (+) |
| G1189670 | NA | non-coding | downstream | 259771 | 56702828 ~ 56752737 (+) |
| G1189040 | NA | other | upstream | 503376 | 55938472 ~ 55939357 (+) |
| G1188386 | NA | other | upstream | 1320114 | 55121261 ~ 55122619 (+) |
| G1188344 | NA | other | upstream | 1445438 | 54993674 ~ 54997295 (+) |
| axin2 | LOC105026129 | other | upstream | 2142420 | 54272638 ~ 54300365 (+) |
| G1189738 | NA | other | downstream | 393359 | 56836416 ~ 56836996 (+) |
| G1189675 | srebf1 | other | downstream | 434871 | 56877928 ~ 56925607 (+) |
| G1189819 | NA | other | downstream | 611396 | 57054453 ~ 57055617 (+) |
| LOC110514101 | LOC106606600 | other | downstream | 1152963 | 57522756 ~ 57640558 (+) |
| LOC110486909 | LOC106601794 | other | downstream | 1180616 | 57613961 ~ 57625405 (+) |
