G1189660 (LOC106601786)


Basic Information

Item Value
gene id G1189660
gene name LOC106601786
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 56670293 ~ 56674238 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1356891
CAGAGCAGAAGCGTATCGCTGCGGCACTGCAGCCTCTTAGGTCTTCCAATATATTTATAGATATTTACACTGACAATATGAAAATCGCAAGTACAACGCCCAGGGCTGAGTTAACCCTTTAACTGCTGCTGTATGAAGGGAGGAGAAGGCTGAGTTGGTAGAGCAactccagggttgtgggttcgattcccacggaggaccagtacaaaaatgtatgcactcactactgtaagtcactctggataagagcgtctgctaaatgactcaaacgtAAATGTATAATGTTAACTCTTTCAACTTAGTCTGAGGATCCAGGTCACACAGGCTGTAGTGTGACCTCTATGTAGTTGTAGTCCTGTTCATATGGCCACCTGAAACATTCAGTATACCCAACATTCCACAGGCACCAGGTTAGCCATACGTAGCCAGATTCTAGGGGCTATTGGTGGAATATAGAACGCCTGTATAGAGCTCAACGCTTCCAGCAATCAAAGACACCTTTTTCAGATCATAAAATGGACAGTAAATAGTACCAAAGTATAATTAGTACCAAAACATAATTAGTACCAAAACATAATTAGTACCAAAACATAATTAGTACCAAAACATAATTAGTACCAAAACATAAAGAGAAATGTTTCAAAAAGAGAAAAACCTTATTTCCACATCCATGTTTAAATGTCATGACACGTCAATAAATCCTTTTCATTTGGAAAAGCGTTGAACAATACAACAGGAACATTGTGCGTGACTGTGTAGCCTGGATTGTAACAGAAAACTGCATTTGACATTTGTTTGGTGTTGTAATGGTAACTTTAGTTGGTATAaaagatgaatggcatgacaacggGGTAGTGCATCTGACTTGTATACTGGTATACACTGTAGTCACAGTTCCAACCTATCTTTACATCCACATGGATAGAGACTAGACTATTTCTCCCAAATAATCATTTCGCTGTTACTGACGTCAACTTGAGGCTGCGTGAAGTGTGAACAAAACTGGTGAGATATTGTTGGTAATAAAATAATCTCACGTGGGGATAAAGCAAAGAGATCATGTATTTTGGGGGAAAAACAGCAAAAATCTCTCATTTGTTGATATGCAGATACATGGGGATTTTTACCAAGACCTCGAAGGCCTATTAAATGAATAGTGTCAGATTGATATTCTCTCATGGCAGTATTTACATAGtcctgtattattattatatgtatgaatcccaaatcgcaccctattccatatatagtgcactacttttgaccagagccctatggagttaggatgtcatttgggagGTACCCTTTGTATCCACATCCTGTAAGCCAGGACTGCCATGCCAGCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAAGTAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGGTAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTAAGCAAAAACAAACGTTTCAGCCATGTCGGTCACACTGTCATCATCTATCACAACTTCCTGTAAAGGCTATTCTCATGTCCTTGAAAAACATGTCCTAGTAAACCACGCAGCATGTTTTCATTCCAGCCATTCCAGCAAAGCATTGATTTAGAAGTTCCTCAGTCAAAAATGCAGAATTTCTGAATAAATGGGGCAGCAATTATCTTAAGTGCCAACCATGAACGAGTGACACATTTTGATGGAAGGCTTTGATGAAAAGAAATGGAAAGATTGAATGATATCTAATATTAATGGACGAGGGCAAGGGCACTCAACACTAGTCAACTTCTGGGCTGCTGAGAGGTGCTTCAATAAGAGCCCTTGTTTAAGAGAGCTGCTTCCATCCAGGCTTAGAAACACTGAATTTAAGTTGAACTGAAAGCTTTATTGAAAAGGAAACCGGTAGCACTTTCTTTAATTGTGTACTGCTTCGACGGGTATTTAGGTGGTACTTATTAGGAAACGATGTGGCATCACTGAGTTCTAGCTGGGGCTTTCACTATACTTTATGCTTAAAATTCACCACAATTGGGAACTACCTGGATCAAAATGGTGTATATTTAAATGCTTGTTTGAATCCCAAAGTACCAAATGAGTACTTTATGTAGTAATTAATGGGGTATTACTGTACAATTACCATTTTACCATGTAATTTCTTAGTAAATACCAGGTACTTTCTGTACTGTAAACAGCCTCTTGTATAATGTCTCATAGTAATGGAGGCCTATAGGCAAAGTCATAGATAGTGATGGGTTGAAAATGGAGGCAACTGATAAATAACGGTCACACTGACATTCATCATAAATAATATACTATATTCTTTTCATACTCTCCCTTTAAAATGAAAGCTTTACAAACCTTCTATTCCGTTCCTCCAGTTACTGTGCATAAATTAATCTCAAACCACATTCTAACTTGTTAAAGTAAAATCTCATTTGGTTGTGTaaatatactgtagctagcttaGCGCTAACCCGAGCAAACAATGATAGCCTTCGCATTCAAACAACCCCCCAAAAGTAAAATAAGAAAACCAACAAAGTAAAATCAAAATGGTCCCTATTTATCATGTCCAGGAGAAGTAATAAAACATTGGTACTTAGCAAAGACcaggcctcttctctcctcagctCACTGCTATATCTGTGGACCAACAGTACCTATATATAAACACACGTACATGGGAGGTTCCATAGAGGCATTGACGGCAAGTCTCGGAATTCACTGAATTCAAAATGGCGGCTCCCGCACAGTCACAGGATCCAGTCAGTCTCTCCGTGAGACCAGACACCCATGGTTGGTTCACCATCAACGGTAGTCTCTTTGGAGGTCCAGGATGGGGAGAAGCGGGAGAACCAGGGGtaccacccctccaccccccatctccctctcttcctagcCAGGCCTCACTACCTGTGCCCTGGGTTCCTGTGGGTGGCTGTGTCCCTGCCCCCTCTGGCTTCTCTGGCCCAGTGGTGGTCGTCCACCTCCACCACGTTACTGTAGCCCTCCTTCTCCACGCAGACAGCCAGGACCTGGAGCACCAGGCGCAGCCTCCGGTCCATGGCCTCCAGGTGGGGCTGGATGAGGACGGGGTGGAGGCGGTCACGCAGCAGGGACTCCTCCATCAGACGGCTCAGCTGGTACTCCTCCTTGGCGAGCAGCTGCAGACGCAAGT
>TU1356892
CAGAGCAGAAGCGTATCGCTGCGGCACTGCAGCCTCTTAGGTCTTCCAATATATTTATAGATATTTACACTGACAATATGAAAATCGCAAGTACAACGCCCAGGGCTGAGTTAACCCTTTAACTGCTGCTGTATGAAGGGAGGAGAAGGCTGAGTTGGTAGAGCAactccagggttgtgggttcgattcccacggaggaccagtacaaaaatgtatgcactcactactgtaagtcactctggataagagcgtctgctaaatgactcaaacgtAAATGTATAATGTTAACTCTTTCAACTTAGTCTGAGGATCCAGGTCACACAGGCTGTAGTGTGACCTCTATGTAGTTGTAGTCCTGTTCATATGGCCACCTGAAACATTCAGTATACCCAACATTCCACAGGCACCAGGTTAGCCATACGTAGCCAGATTCTAGGGGCTATTGGTGGAATATAGAACGCCTGTATAGAGCTCAACGCTTCCAGCAATCAAAGACACCTTTTTCAGATCATAAAATGGACAGTAAATAGTACCAAAGTATAATTAGTACCAAAACATAATTAGTACCAAAACATAATTAGTACCAAAACATAATTAGTACCAAAACATAATTAGTACCAAAACATAAAGAGAAATGTTTCAAAAAGAGAAAAACCTTATTTCCACATCCATGTTTAAATGTCATGACACGTCAATAAATCCTTTTCATTTGGAAAAGCGTTGAACAATACAACAGGAACATTGTGCGTGACTGTGTAGCCTGGATTGTAACAGAAAACTGCATTTGACATTTGTTTGGTGTTGTAATGGTAACTTTAGTTGGTATAaaagatgaatggcatgacaacggGGTAGTGCATCTGACTTGTATACTGGTATACACTGTAGTCACAGTTCCAACCTATCTTTACATCCACATGGATAGAGACTAGACTATTTCTCCCAAATAATCATTTCGCTGTTACTGACGTCAACTTGAGGCTGCGTGAAGTGTGAACAAAACTGGTGAGATATTGTTGGTAATAAAATAATCTCACGTGGGGATAAAGCAAAGAGATCATGTATTTTGGGGGAAAAACAGCAAAAATCTCTCATTTGTTGATATGCAGATACATGGGGATTTTTACCAAGACCTCGAAGGCCTATTAAATGAATAGTGTCAGATTGATATTCTCTCATGGCAGTATTTACATAGtcctgtattattattatatgtatgaatcccaaatcgcaccctattccatatatagtgcactacttttgaccagagccctatggagttaggatgtcatttgggagGTACCCTTTGTATCCACATCCTGTAAGCCAGGACTGCCATGCCAGCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAAGTAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGATAGGCTCAGCTAACGTGAGATCTCTGAGACCAGAACAGGTAGGCTCAGCTAACGTGAGATCTAAGCAAAAACAAACGTTTCAGCCATGTCGGTCACACTGTCATCATCTATCACAACTTCCTGTAAAGGCTATTCTCATGTCCTTGAAAAACATGTCCTAGTAAACCACGCAGCATGTTTTCATTCCAGCCATTCCAGCAAAGCATTGATTTAGAAGTTCCTCAGTCAAAAATGCAGAATTTCTGAATAAATGGGGCAGCAATTATCTTAAGTGCCAACCATGAACGAGTGACACATTTTGATGGAAGGCTTTGATGAAAAGAAATGGAAAGATTGAATGATATCTAATATTAATGGACGAGGGCAAGGGCACTCAACACTAGTCAACTTCTGGGCTGCTGAGAGGTGCTTCAATAAGAGCCCTTGTTTAAGAGAGCTGCTTCCATCCAGGCTTAGAAACACTGAATTTAAGTTGAACTGAAAGCTTTATTGAAAAGGAAACCGGTAGCACTTTCTTTAATTGTGTACTGCTTCGACGGGTATTTAGGTGGTACTTATTAGGAAACGATGTGGCATCACTGAGTTCTAGCTGGGGCTTTCACTATACTTTATGCTTAAAATTCACCACAATTGGGAACTACCTGGATCAAAATGGTGTATATTTAAATGCTTGTTTGAATCCCAAAGTACCAAATGAGTACTTTATGTAGTAATTAATGGGGTATTACTGTACAATTACCATTTTACCATGTAATTTCTTAGTAAATACCAGGTACTTTCTGTACTGTAAACAGCCTCTTGTATAATGTCTCATAGTAATGGAGGCCTATAGGCAAAGTCATAGATAGTGATGGGTTGAAAATGGAGGCAACTGATAAATAACGGTCACACTGACATTCATCATAAATAATATACTATATTCTTTTCATACTCTCCCTTTAAAATGAAAGCTTTACAAACCTTCTATTCCGTTCCTCCAGTTACTGTGCATAAATTAATCTCAAACCACATTCTAACTTGTTAAAGTAAAATCTCATTTGGTTGTGTaaatatactgtagctagcttaGCGCTAACCCGAGCAAACAATGATAGCCTTCGCATTCAAACAACCCCCCAAAAGTAAAATAAGAAAACCAACAAAGTAAAATCAAAATGGTCCCTATTTATCATGTCCAGGAGAAGTAATAAAACATTGGTACTTAGCAAAGACcaggcctcttctctcctcagctCACTGCTATATCTGTGGACCAACAGTACCTATATATAAACACACGTACATGGGAGGTTCCATAGAGGCATTGACGGCAAGTCTCGGAATTCACTGAATTCAAAATGGCGGCTCCCGCACAGTCACAGGATCCAGTCAGTCTCTCCGTGAGACCAGACACCCATGGTTGGTTCACCATCAACGGTAGTCTCTTTGGAGGTCCAGGATGGGGAGAAGCGGGAGAACCAGGGGtaccacccctccaccccccatctccctctcttcctagcCAGGCCTCACTACCTGTGCCCTGGGTTCCTGTGGGTGGCTGTGTCCCTGCCCCCTCTGGCTTCTCTGGCCCAGTGGTGGTCGTCCACCTCCACCACGTTACTGTAGCCCTCCTTCTCCACGCAGACAGCCAGGACCTGGAGCACCAGGCGCAGCCTCCGGTCCATGGCCTCCAGGTGGGGCTGGATGAGGACGGGGTGGAGGCGGTCACGCAGCAGGGACTCCTCCATCAGACGGCTCAGCTGGTACTCCTCCTTGGCGAGCAGCTGCAGACGCAAGT

Function

NR:

description
PREDICTED: extracellular serine/threonine protein kinase FAM20C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1356891 False 3413 TUCP 0.43 2 56670293 56674238
TU1356892 True 3374 TUCP 0.43 3 56670293 56674238

Neighbor

gene id symbol gene type direction distance location
LOC110515093 LOC106606674 coding downstream 419368 56226179 ~ 56250925 (-)
LOC110539043 LOC106601829 coding downstream 466483 56125290 ~ 56203810 (-)
LOC110485237 LOC106606659 coding downstream 559322 56088292 ~ 56110984 (-)
LOC110486851 LOC106606669 coding downstream 633471 56029421 ~ 56036822 (-)
LOC110538789 LOC106606674 coding downstream 1117793 55533247 ~ 55574537 (-)
LOC110486859 srebf1 coding upstream 237127 56911365 ~ 56957646 (-)
LOC110486860 tom1l2 coding upstream 287839 56960592 ~ 57007990 (-)
LOC110486894 LOC106601810 coding upstream 380215 57054453 ~ 57085521 (-)
nduba LOC106601814 coding upstream 420074 57094312 ~ 57099778 (-)
LOC110485244 LOC106601809 coding upstream 438671 57112909 ~ 57129442 (-)
G1189568 NA non-coding downstream 94845 56575194 ~ 56575448 (-)
G1189564 NA non-coding downstream 98925 56571051 ~ 56571368 (-)
G1189563 NA non-coding downstream 99733 56570314 ~ 56570560 (-)
G1189532 NA non-coding downstream 127153 56452331 ~ 56543140 (-)
G1189544 NA non-coding downstream 158308 56510829 ~ 56511985 (-)
G1190101 NA non-coding upstream 29060 56703298 ~ 56719329 (-)
G1190104 NA non-coding upstream 98628 56772866 ~ 56779738 (-)
G1190109 NA non-coding upstream 107857 56782095 ~ 56788604 (-)
G1190108 NA non-coding upstream 124229 56798467 ~ 56801654 (-)
G1190119 NA non-coding upstream 128436 56802674 ~ 56802917 (-)
G1189279 LOC106601786 other downstream 754408 55912224 ~ 55915885 (-)
LOC110485238 LOC106601829 other downstream 1215059 55434816 ~ 55509918 (-)
LOC110516592 LOC106601772 other downstream 1457578 55209614 ~ 55242150 (-)
LOC110486836 LOC106606701 other downstream 1643845 55022619 ~ 55026465 (-)
G1190199 LOC106601813 other upstream 414933 57089171 ~ 57089915 (-)
G1190405 NA other upstream 821750 57495988 ~ 57499155 (-)
LOC110486915 LOC106606556 other upstream 1025013 57698059 ~ 57706813 (-)
G1190628 NA other upstream 1291899 57964952 ~ 57994099 (-)

Expression


Co-expression Network