Gene
RNA
| Item | Value |
|---|---|
| gene id | G1189670 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 56702828 ~ 56752737 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1356902 | False | 865 | lncRNA | 0.40 | 4 | 56702828 | 56722853 |
| TU1356903 | True | 314 | lncRNA | 0.40 | 2 | 56702828 | 56752737 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938096 | NA | coding | upstream | 22964 | 56678602 ~ 56679864 (+) |
| LOC110538765 | LOC105013005 | coding | upstream | 28513 | 56596621 ~ 56674315 (+) |
| LOC110486855 | bri3 | coding | upstream | 581383 | 56114163 ~ 56121445 (+) |
| LOC110485236 | LOC106606588 | coding | upstream | 614635 | 56035640 ~ 56088193 (+) |
| LOC110538766 | LOC105013005 | coding | upstream | 786924 | 55834111 ~ 55915904 (+) |
| LOC110486865 | NA | coding | downstream | 207861 | 56960598 ~ 56963017 (+) |
| LOC110517037 | drc3 | coding | downstream | 255263 | 57008000 ~ 57019247 (+) |
| LOC110516169 | LOC106601817 | coding | downstream | 266965 | 57019702 ~ 57027741 (+) |
| LOC110486862 | LOC106606647 | coding | downstream | 296195 | 57048932 ~ 57053449 (+) |
| LOC110486876 | rn151 | coding | downstream | 333111 | 57085848 ~ 57089925 (+) |
| G1189668 | NA | non-coding | upstream | 19946 | 56682476 ~ 56682882 (+) |
| G1189607 | NA | non-coding | upstream | 39558 | 56662668 ~ 56663270 (+) |
| G1189598 | NA | non-coding | upstream | 52716 | 56648573 ~ 56650112 (+) |
| G1189499 | NA | non-coding | upstream | 208542 | 56493805 ~ 56494286 (+) |
| G1189487 | NA | non-coding | upstream | 259771 | 56442733 ~ 56443057 (+) |
| G1189697 | NA | non-coding | downstream | 4977 | 56757714 ~ 56761946 (+) |
| G1189701 | NA | non-coding | downstream | 12699 | 56765436 ~ 56785201 (+) |
| G1189702 | NA | non-coding | downstream | 14308 | 56767045 ~ 56768348 (+) |
| G1189707 | NA | non-coding | downstream | 33478 | 56786215 ~ 56788399 (+) |
| G1189711 | NA | non-coding | downstream | 40820 | 56793557 ~ 56798251 (+) |
| G1189040 | NA | other | upstream | 763471 | 55938472 ~ 55939357 (+) |
| LOC110539040 | LOC106601832 | other | upstream | 1336512 | 55340702 ~ 55394765 (+) |
| G1188386 | NA | other | upstream | 1580209 | 55121261 ~ 55122619 (+) |
| G1188344 | NA | other | upstream | 1705533 | 54993674 ~ 54997295 (+) |
| axin2 | LOC105026129 | other | upstream | 2402515 | 54272638 ~ 54300365 (+) |
| G1189738 | NA | other | downstream | 83679 | 56836416 ~ 56836996 (+) |
| G1189675 | srebf1 | other | downstream | 125191 | 56877928 ~ 56925607 (+) |
| G1189819 | NA | other | downstream | 301716 | 57054453 ~ 57055617 (+) |
| LOC110514101 | LOC106606600 | other | downstream | 843283 | 57522756 ~ 57640558 (+) |
| LOC110486909 | LOC106601794 | other | downstream | 870936 | 57613961 ~ 57625405 (+) |
