G1189727


Basic Information

Item Value
gene id G1189727
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 56822727 ~ 56822931 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1356978
ctatctatctatctatctatctgtctatctgtctgtctatctctcccgctccctctctctctctctctctctctctctctctctctggctctcaattcaattcgaagggctttattggcatgggaaacatatgtttacattgccaaagcaagtaaaatgtaaacatttcaaatgtcatattatggctacaTAGACTACATACAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1356978 True 205 lncRNA 0.39 1 56822727 56822931

Neighbor

gene id symbol gene type direction distance location
LOC118938096 NA coding upstream 142863 56678602 ~ 56679864 (+)
LOC110538765 LOC105013005 coding upstream 148412 56596621 ~ 56674315 (+)
LOC110486855 bri3 coding upstream 701282 56114163 ~ 56121445 (+)
LOC110485236 LOC106606588 coding upstream 734534 56035640 ~ 56088193 (+)
LOC110538766 LOC105013005 coding upstream 906823 55834111 ~ 55915904 (+)
LOC110486865 NA coding downstream 137667 56960598 ~ 56963017 (+)
LOC110517037 drc3 coding downstream 185069 57008000 ~ 57019247 (+)
LOC110516169 LOC106601817 coding downstream 196771 57019702 ~ 57027741 (+)
LOC110486862 LOC106606647 coding downstream 226001 57048932 ~ 57053449 (+)
LOC110486876 rn151 coding downstream 262917 57085848 ~ 57089925 (+)
G1189725 NA non-coding upstream 3680 56817860 ~ 56819047 (+)
G1189723 NA non-coding upstream 7634 56814893 ~ 56815093 (+)
G1189718 NA non-coding upstream 14477 56808043 ~ 56808250 (+)
G1189711 NA non-coding upstream 24476 56793557 ~ 56798251 (+)
G1189707 NA non-coding upstream 34328 56786215 ~ 56788399 (+)
G1189744 NA non-coding downstream 43541 56866472 ~ 56866814 (+)
G1189745 NA non-coding downstream 44485 56867416 ~ 56916132 (+)
G1189760 NA non-coding downstream 89581 56912512 ~ 56916299 (+)
LOC118938331 LOC106606599 non-coding downstream 94594 56688583 ~ 56926185 (+)
G1189774 NA non-coding downstream 121948 56944879 ~ 56945436 (+)
G1189040 NA other upstream 883370 55938472 ~ 55939357 (+)
LOC110539040 LOC106601832 other upstream 1456411 55340702 ~ 55394765 (+)
G1188386 NA other upstream 1700108 55121261 ~ 55122619 (+)
G1188344 NA other upstream 1825432 54993674 ~ 54997295 (+)
axin2 LOC105026129 other upstream 2522414 54272638 ~ 54300365 (+)
G1189738 NA other downstream 13485 56836416 ~ 56836996 (+)
G1189675 srebf1 other downstream 54997 56877928 ~ 56925607 (+)
G1189819 NA other downstream 231522 57054453 ~ 57055617 (+)
LOC110514101 LOC106606600 other downstream 773089 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other downstream 800742 57613961 ~ 57625405 (+)

Expression


Co-expression Network