G1189738


Basic Information

Item Value
gene id G1189738
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 56836416 ~ 56836996 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1356992
gaggtagaaatgctactagtggtaatggtagtagtagggatatcagaggtagaaatgctactattggtaatggtagtagtagagatatcagaggtagaagtgctactagtggtaatggtagtagtagagatatcagaggtagaagtgctactagtggtaatggtagtagtagggatatcagaggtagaagtgctactagtggtaatggtagtagtagagatatcagaggtagaagtgctactagtggtaatggtagtagtagagatatcagaggtagaagtgctactagtggtaatggtagtagtagagatatcagaggtagaaatgctactagtggtaatggtagtagtagagatatcagaggtagaaatgctactagtggtaatggtagtagtagagatatcagaggtagaaatgctactattggtaatggtagtagtagagatatcagaggtagaaatgctactagtggtaatggtagtagtatggAT

Function

NR:

description
PREDICTED: translation initiation factor IF-2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1356992 True 491 TUCP 0.39 2 56836416 56836996

Neighbor

gene id symbol gene type direction distance location
LOC118938096 NA coding upstream 156552 56678602 ~ 56679864 (+)
LOC110538765 LOC105013005 coding upstream 162101 56596621 ~ 56674315 (+)
LOC110538788 bri3 coding upstream 712832 55424865 ~ 56123584 (+)
LOC110486855 bri3 coding upstream 714971 56114163 ~ 56121445 (+)
LOC110485236 LOC106606588 coding upstream 748223 56035640 ~ 56088193 (+)
LOC110486865 NA coding downstream 123602 56960598 ~ 56963017 (+)
LOC110517037 drc3 coding downstream 171004 57008000 ~ 57019247 (+)
LOC110516169 LOC106601817 coding downstream 182706 57019702 ~ 57027741 (+)
LOC110486862 LOC106606647 coding downstream 211936 57048932 ~ 57053449 (+)
LOC110486876 rn151 coding downstream 248852 57085848 ~ 57089925 (+)
G1189727 NA non-coding upstream 13485 56822727 ~ 56822931 (+)
G1189725 NA non-coding upstream 17369 56817860 ~ 56819047 (+)
G1189723 NA non-coding upstream 21323 56814893 ~ 56815093 (+)
G1189718 NA non-coding upstream 28166 56808043 ~ 56808250 (+)
G1189711 NA non-coding upstream 38165 56793557 ~ 56798251 (+)
G1189744 NA non-coding downstream 29476 56866472 ~ 56866814 (+)
G1189745 NA non-coding downstream 30420 56867416 ~ 56916132 (+)
G1189760 NA non-coding downstream 75516 56912512 ~ 56916299 (+)
LOC118938331 LOC106606599 non-coding downstream 80529 56688583 ~ 56926185 (+)
G1189774 NA non-coding downstream 107883 56944879 ~ 56945436 (+)
G1189040 NA other upstream 897059 55938472 ~ 55939357 (+)
LOC110539040 LOC106601832 other upstream 1470100 55340702 ~ 55394765 (+)
G1188386 NA other upstream 1713797 55121261 ~ 55122619 (+)
G1188344 NA other upstream 1839121 54993674 ~ 54997295 (+)
axin2 LOC105026129 other upstream 2536103 54272638 ~ 54300365 (+)
G1189675 srebf1 other downstream 40932 56877928 ~ 56925607 (+)
G1189819 NA other downstream 217457 57054453 ~ 57055617 (+)
LOC110514101 LOC106606600 other downstream 759024 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other downstream 786677 57613961 ~ 57625405 (+)
G1190568 NA other downstream 1128520 57950494 ~ 57994502 (+)

Expression


Co-expression Network