G1189802


Basic Information

Item Value
gene id G1189802
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57012691 ~ 57012917 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1357071
acttagtttgacatgtttctacgacctgtaatataactttttgaacttttcgtccgacgttcggctggacctgaacgcgcgtttggatttgtttaccaaacgccctaacaagagaagctatttggacataaatgatgaactttatcaaacaaatcaaacatttattgtggaactgtgattcctgggagtgcattctgatgaagatcatcaaaggtaagtgaatattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1357071 True 227 lncRNA 0.37 1 57012691 57012917

Neighbor

gene id symbol gene type direction distance location
LOC110486865 NA coding upstream 49674 56960598 ~ 56963017 (+)
LOC118938331 LOC106606599 coding upstream 93644 56688583 ~ 56926185 (+)
LOC118938096 NA coding upstream 332827 56678602 ~ 56679864 (+)
LOC110538765 LOC105013005 coding upstream 338376 56596621 ~ 56674315 (+)
LOC110486855 bri3 coding upstream 891246 56114163 ~ 56121445 (+)
LOC110516169 LOC106601817 coding downstream 6785 57019702 ~ 57027741 (+)
LOC110486862 LOC106606647 coding downstream 36015 57048932 ~ 57053449 (+)
LOC110486876 rn151 coding downstream 72931 57085848 ~ 57089925 (+)
LOC110515850 rs2 coding downstream 77384 57090301 ~ 57092931 (+)
LOC118938613 NA coding downstream 78141 57091058 ~ 57091194 (+)
G1189799 NA non-coding upstream 5428 57007040 ~ 57007263 (+)
G1189795 NA non-coding upstream 22349 56990030 ~ 56990342 (+)
G1189792 NA non-coding upstream 25419 56987038 ~ 56987272 (+)
G1189791 NA non-coding upstream 27109 56985299 ~ 56985582 (+)
G1189790 NA non-coding upstream 27604 56984861 ~ 56985087 (+)
G1189803 NA non-coding downstream 659 57013576 ~ 57013846 (+)
G1189804 NA non-coding downstream 4559 57017476 ~ 57017700 (+)
G1189816 NA non-coding downstream 35071 57047988 ~ 57048481 (+)
G1189818 NA non-coding downstream 41243 57054160 ~ 57054390 (+)
G1189675 srebf1 other upstream 87084 56877928 ~ 56925607 (+)
G1189738 NA other upstream 175695 56836416 ~ 56836996 (+)
G1189040 NA other upstream 1073334 55938472 ~ 55939357 (+)
LOC110539040 LOC106601832 other upstream 1646375 55340702 ~ 55394765 (+)
G1188386 NA other upstream 1890072 55121261 ~ 55122619 (+)
G1189819 NA other downstream 41536 57054453 ~ 57055617 (+)
LOC110514101 LOC106606600 other downstream 583103 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other downstream 610756 57613961 ~ 57625405 (+)
G1190568 NA other downstream 952599 57950494 ~ 57994502 (+)
G1190689 NA other downstream 1027969 58040886 ~ 58041295 (+)

Expression


Co-expression Network