G1189803


Basic Information

Item Value
gene id G1189803
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57013576 ~ 57013846 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1357072
gtgggacgctaccgtccaaCATATCCCAGAGTTAAGATCTACATTCTTGGCCGCCCTTAAATCTGAACTGAATAACTTCTAAGAGGTTAGGAGTAGAGGTTTTTACGGATCCACCTGTACCAATCCAAGATACCCGATCTGGGACCCGATTAGGGGCAGATCCAGAATTCTAAATAATGTCATGGGTCTGGGTCGGATCTCATGAAATTCTCGGGTCTCTGGTATGTGTCCTTTTTTGtcctttttttaaattacatgttTTACTTTGACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1357072 True 271 lncRNA 0.43 1 57013576 57013846

Neighbor

gene id symbol gene type direction distance location
LOC110486865 NA coding upstream 50559 56960598 ~ 56963017 (+)
LOC118938331 LOC106606599 coding upstream 94529 56688583 ~ 56926185 (+)
LOC118938096 NA coding upstream 333712 56678602 ~ 56679864 (+)
LOC110538765 LOC105013005 coding upstream 339261 56596621 ~ 56674315 (+)
LOC110486855 bri3 coding upstream 892131 56114163 ~ 56121445 (+)
LOC110516169 LOC106601817 coding downstream 5856 57019702 ~ 57027741 (+)
LOC110486862 LOC106606647 coding downstream 35086 57048932 ~ 57053449 (+)
LOC110486876 rn151 coding downstream 72002 57085848 ~ 57089925 (+)
LOC110515850 rs2 coding downstream 76455 57090301 ~ 57092931 (+)
LOC118938613 NA coding downstream 77212 57091058 ~ 57091194 (+)
G1189802 NA non-coding upstream 659 57012691 ~ 57012917 (+)
G1189799 NA non-coding upstream 6313 57007040 ~ 57007263 (+)
G1189795 NA non-coding upstream 23234 56990030 ~ 56990342 (+)
G1189792 NA non-coding upstream 26304 56987038 ~ 56987272 (+)
G1189791 NA non-coding upstream 27994 56985299 ~ 56985582 (+)
G1189804 NA non-coding downstream 3630 57017476 ~ 57017700 (+)
G1189816 NA non-coding downstream 34142 57047988 ~ 57048481 (+)
G1189818 NA non-coding downstream 40314 57054160 ~ 57054390 (+)
G1189822 NA non-coding downstream 43122 57056968 ~ 57057222 (+)
G1189675 srebf1 other upstream 87969 56877928 ~ 56925607 (+)
G1189738 NA other upstream 176580 56836416 ~ 56836996 (+)
G1189040 NA other upstream 1074219 55938472 ~ 55939357 (+)
LOC110539040 LOC106601832 other upstream 1647260 55340702 ~ 55394765 (+)
G1188386 NA other upstream 1890957 55121261 ~ 55122619 (+)
G1189819 NA other downstream 40607 57054453 ~ 57055617 (+)
LOC110514101 LOC106606600 other downstream 582174 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other downstream 609827 57613961 ~ 57625405 (+)
G1190568 NA other downstream 951670 57950494 ~ 57994502 (+)
G1190689 NA other downstream 1027040 58040886 ~ 58041295 (+)

Expression


Co-expression Network