Gene
RNA
| Item | Value |
|---|---|
| gene id | G1189823 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 57057550 ~ 57058011 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1357100 | True | 379 | lncRNA | 0.46 | 2 | 57057550 | 57058011 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486862 | LOC106606647 | coding | upstream | 4101 | 57048932 ~ 57053449 (+) |
| LOC110516169 | LOC106601817 | coding | upstream | 29810 | 57019702 ~ 57027741 (+) |
| LOC110517037 | drc3 | coding | upstream | 38303 | 57008000 ~ 57019247 (+) |
| LOC110486865 | NA | coding | upstream | 94533 | 56960598 ~ 56963017 (+) |
| LOC118938331 | LOC106606599 | coding | upstream | 138503 | 56688583 ~ 56926185 (+) |
| LOC110486876 | rn151 | coding | downstream | 27837 | 57085848 ~ 57089925 (+) |
| LOC110515850 | rs2 | coding | downstream | 32290 | 57090301 ~ 57092931 (+) |
| LOC118938613 | NA | coding | downstream | 33047 | 57091058 ~ 57091194 (+) |
| LOC110486871 | rpl3l | coding | downstream | 42191 | 57100202 ~ 57112612 (+) |
| LOC118938566 | NA | coding | downstream | 53960 | 57111971 ~ 57112096 (+) |
| G1189822 | NA | non-coding | upstream | 328 | 57056968 ~ 57057222 (+) |
| G1189818 | NA | non-coding | upstream | 3160 | 57054160 ~ 57054390 (+) |
| G1189816 | NA | non-coding | upstream | 9069 | 57047988 ~ 57048481 (+) |
| G1189804 | NA | non-coding | upstream | 39850 | 57017476 ~ 57017700 (+) |
| G1189832 | NA | non-coding | downstream | 16574 | 57074585 ~ 57074861 (+) |
| G1189833 | NA | non-coding | downstream | 17857 | 57075868 ~ 57079580 (+) |
| G1189840 | NA | non-coding | downstream | 49618 | 57107629 ~ 57108082 (+) |
| LOC110486874 | LOC106601805 | non-coding | downstream | 96506 | 57149314 ~ 57155987 (+) |
| G1189901 | NA | non-coding | downstream | 147862 | 57205873 ~ 57208927 (+) |
| G1189819 | NA | other | upstream | 1933 | 57054453 ~ 57055617 (+) |
| G1189675 | srebf1 | other | upstream | 131943 | 56877928 ~ 56925607 (+) |
| G1189738 | NA | other | upstream | 220554 | 56836416 ~ 56836996 (+) |
| G1189040 | NA | other | upstream | 1118193 | 55938472 ~ 55939357 (+) |
| LOC110539040 | LOC106601832 | other | upstream | 1691234 | 55340702 ~ 55394765 (+) |
| LOC110514101 | LOC106606600 | other | downstream | 538009 | 57522756 ~ 57640558 (+) |
| LOC110486909 | LOC106601794 | other | downstream | 565662 | 57613961 ~ 57625405 (+) |
| G1190568 | NA | other | downstream | 907505 | 57950494 ~ 57994502 (+) |
| G1190689 | NA | other | downstream | 982875 | 58040886 ~ 58041295 (+) |
| LOC110538555 | NA | other | downstream | 1478816 | 58521363 ~ 58557066 (+) |
