G1190199 (LOC106601813)


Basic Information

Item Value
gene id G1190199
gene name LOC106601813
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57089171 ~ 57089915 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1357558
CTGACTTTATTTGTAAAATATATCATCCTTTACAAATCAAAATGTTAAAGGACGCCGTACAAAATTGTTCTAACtttatacattttcaaatgaAATATGAAGTTTCAATATCAACACACCCTCAAAGCAATTATGACTAAATGTGCTATTTGAAGCAGTCCATCCCTGAAAATTCAATTTCCACAGGTCTTTCATACTTAGTGCTAGGAATAAAATTAAAATCTGCATAGTCCTAAACAGTTCAAGTGTCAGAGATAATTGTGTGTGGGAGTCATTTTTATAAATACATTGCATCAGGACTCAGGAGCTGCTGTTACTGCTACTGAAACTCCCACTGGTTTCACCCAggtcctcctcttccacctcctccagtTCGTCCATGACCTCCAGGCTCTCACAGATCAGGCCGATCTGCCTCTTCATGTCGGCCATGGTGCTCTgcatcctcctcatcttcctttGGAGGGCTGCTGCGATGGCCCGGTGGTTCCTCTGCCTGGCCTCGTACTCATGCCTCAGCTGCCTGTAGCAGTTGTGCTTGGCCTGGGTGCGGTGGGACAGCACAGTGCCACAGCCCATGTGGCAGGGTTGGCTCCAGTGCTCACAGTGCCTGGCGTGGGCATCCAGGTCCCTGCGGAGGAGCTGGGCACGGCAGCCCTGGTAGGGGCAGGGAATGAGCTCGAACAGGCAGCTCATGCTGTGGCAGTACTGCTCTGACAGGGCTAAGGTATGCGGGCAGCCACGG

Function

NR:

description
RING finger protein 151-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1357558 True 745 TUCP 0.50 1 57089171 57089915

Neighbor

gene id symbol gene type direction distance location
LOC110486894 LOC106601810 coding downstream 3650 57054453 ~ 57085521 (-)
LOC110486860 tom1l2 coding downstream 81181 56960592 ~ 57007990 (-)
LOC110486859 srebf1 coding downstream 131525 56911365 ~ 56957646 (-)
LOC110515093 LOC106606674 coding downstream 838246 56226179 ~ 56250925 (-)
LOC110539043 LOC106601829 coding downstream 885361 56125290 ~ 56203810 (-)
nduba LOC106601814 coding upstream 4397 57094312 ~ 57099778 (-)
LOC110485244 LOC106601809 coding upstream 22994 57112909 ~ 57129442 (-)
LOC110486881 LOC106606582 coding upstream 72060 57161975 ~ 57164019 (-)
LOC110516439 LOC106601803 coding upstream 85081 57174996 ~ 57189319 (-)
LOC118936526 LOC106606576 coding upstream 518105 57598591 ~ 57612663 (-)
G1190225 NA non-coding downstream 12021 57076416 ~ 57077150 (-)
G1190191 NA non-coding upstream 775 57090690 ~ 57092938 (-)
G1190242 NA non-coding upstream 62372 57152287 ~ 57152702 (-)
G1190243 NA non-coding upstream 62791 57152706 ~ 57152967 (-)
G1190265 NA non-coding upstream 106518 57196433 ~ 57250738 (-)
G1190268 NA non-coding upstream 109677 57199592 ~ 57241428 (-)
G1189660 LOC106601786 other downstream 414933 56670293 ~ 56674238 (-)
LOC110485237 LOC106606659 other downstream 978187 56088292 ~ 56110984 (-)
G1189279 LOC106601786 other downstream 1173286 55912224 ~ 55915885 (-)
LOC110485238 LOC106601829 other downstream 1633937 55434816 ~ 55509918 (-)
G1190405 NA other upstream 406073 57495988 ~ 57499155 (-)
LOC110486915 LOC106606556 other upstream 609336 57698059 ~ 57706813 (-)
G1190628 NA other upstream 876222 57964952 ~ 57994099 (-)
LOC110514412 NA other upstream 1497410 58561680 ~ 58588526 (-)
LOC110486955 NA other upstream 1506861 58588778 ~ 58603975 (-)

Expression


Co-expression Network