G1190014


Basic Information

Item Value
gene id G1190014
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57511651 ~ 57516717 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1357324
tcatgattgtgtcccacttgtggttgattcttgtcatgtattgtcatgttgtatcttgtttctgtcctttcccttcaccctgtctccctctgctggtcgtactaggttaccgtttcttcccctctttcccccagctgttccttgtcttctctgactacctcattcaccccttttcccacctgttccctttttccctctgattaggtccctatatccctctctgtttctgctcctgtctttgtcggattcttgtttgtgttgttcatgcctgaaccagactatcgtcatgtttgctgcaaccttgtcctgtcctgtcggaacctgccggtccatctgagcctacgttttgttttgttattaaagaagctctgtttacgttaattcgcttttgggtcctcattcacgcaccgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1357324 True 411 lncRNA 0.47 2 57511651 57516717

Neighbor

gene id symbol gene type direction distance location
LOC110516540 LOC106606577 coding upstream 52190 57303445 ~ 57459461 (+)
LOC110486905 LOC106606635 coding upstream 219814 57276116 ~ 57291837 (+)
LOC118936426 LOC106601799 coding upstream 239541 57267206 ~ 57272110 (+)
LOC110486898 NA coding upstream 249910 57250903 ~ 57261741 (+)
LOC118936313 LOC106606633 coding upstream 267799 57225575 ~ 57243852 (+)
LOC110514101 LOC106606600 coding downstream 6039 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 coding downstream 97244 57613961 ~ 57625405 (+)
c13h17orf75 LOC106601793 coding downstream 121714 57638431 ~ 57655166 (+)
LOC110486914 LOC106606529 coding downstream 211472 57728189 ~ 57739064 (+)
rln3a LOC106606557 coding downstream 254723 57771440 ~ 57773246 (+)
G1189978 NA non-coding upstream 95409 57415236 ~ 57416242 (+)
G1189949 NA non-coding upstream 144159 57331759 ~ 57367492 (+)
G1189866 NA non-coding upstream 233029 57276972 ~ 57278622 (+)
G1189904 NA non-coding upstream 256479 57217534 ~ 57255172 (+)
G1189901 NA non-coding upstream 302724 57205873 ~ 57208927 (+)
G1190066 NA non-coding downstream 169617 57686334 ~ 57687163 (+)
G1190041 NA non-coding downstream 171235 57687952 ~ 57688623 (+)
G1190074 NA non-coding downstream 185191 57701908 ~ 57702360 (+)
G1189819 NA other upstream 456034 57054453 ~ 57055617 (+)
G1189675 srebf1 other upstream 586044 56877928 ~ 56925607 (+)
G1189738 NA other upstream 674655 56836416 ~ 56836996 (+)
G1189040 NA other upstream 1572294 55938472 ~ 55939357 (+)
LOC110539040 LOC106601832 other upstream 2145335 55340702 ~ 55394765 (+)
G1190568 NA other downstream 448799 57950494 ~ 57994502 (+)
G1190689 NA other downstream 524169 58040886 ~ 58041295 (+)
LOC110538555 NA other downstream 1020110 58521363 ~ 58557066 (+)

Expression


Co-expression Network