Gene
RNA
| Item | Value |
|---|---|
| gene id | G1190041 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 57687952 ~ 57688623 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1357357 | True | 621 | lncRNA | 0.44 | 2 | 57687952 | 57688623 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| c13h17orf75 | LOC106601793 | coding | upstream | 32884 | 57638431 ~ 57655166 (+) |
| LOC110486909 | LOC106601794 | coding | upstream | 62547 | 57613961 ~ 57625405 (+) |
| LOC110514101 | LOC106606600 | coding | upstream | 86629 | 57522756 ~ 57640558 (+) |
| LOC110516540 | LOC106606577 | coding | upstream | 228491 | 57303445 ~ 57459461 (+) |
| LOC110486905 | LOC106606635 | coding | upstream | 396115 | 57276116 ~ 57291837 (+) |
| LOC110486914 | LOC106606529 | coding | downstream | 39566 | 57728189 ~ 57739064 (+) |
| rln3a | LOC106606557 | coding | downstream | 82817 | 57771440 ~ 57773246 (+) |
| LOC110486918 | LOC106568321 | coding | downstream | 86286 | 57774909 ~ 57806286 (+) |
| LOC110486936 | LOC106606533 | coding | downstream | 122275 | 57810898 ~ 57837364 (+) |
| LOC118938624 | NA | coding | downstream | 124715 | 57813338 ~ 57813408 (+) |
| G1190066 | NA | non-coding | upstream | 789 | 57686334 ~ 57687163 (+) |
| G1190014 | NA | non-coding | upstream | 171235 | 57511651 ~ 57516717 (+) |
| G1189978 | NA | non-coding | upstream | 271710 | 57415236 ~ 57416242 (+) |
| G1190074 | NA | non-coding | downstream | 13285 | 57701908 ~ 57702360 (+) |
| G1190072 | LOC106606528 | non-coding | downstream | 24752 | 57713375 ~ 57713983 (+) |
| G1190083 | NA | non-coding | downstream | 51454 | 57740077 ~ 57740525 (+) |
| G1190084 | NA | non-coding | downstream | 55628 | 57744251 ~ 57744749 (+) |
| G1190085 | NA | non-coding | downstream | 56202 | 57744825 ~ 57746402 (+) |
| G1189819 | NA | other | upstream | 632335 | 57054453 ~ 57055617 (+) |
| G1189675 | srebf1 | other | upstream | 762345 | 56877928 ~ 56925607 (+) |
| G1189738 | NA | other | upstream | 850956 | 56836416 ~ 56836996 (+) |
| G1190568 | NA | other | downstream | 276893 | 57950494 ~ 57994502 (+) |
| G1190689 | NA | other | downstream | 352263 | 58040886 ~ 58041295 (+) |
| LOC110538555 | NA | other | downstream | 848204 | 58521363 ~ 58557066 (+) |
| G1191444 | NA | other | downstream | 1579448 | 59268071 ~ 59270262 (+) |
| G1191529 | LOC106601890 | other | downstream | 1697549 | 59381313 ~ 59388776 (+) |
