Gene
RNA
| Item | Value |
|---|---|
| gene id | G1190538 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 57897174 ~ 57898144 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1357947 | True | 971 | lncRNA | 0.44 | 1 | 57897174 | 57898144 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486929 | LOC106592861 | coding | upstream | 39180 | 57847447 ~ 57857994 (+) |
| LOC110486928 | LOC106606535 | coding | upstream | 51466 | 57838961 ~ 57845708 (+) |
| LOC118938625 | NA | coding | upstream | 76343 | 57820761 ~ 57820831 (+) |
| LOC118938623 | NA | coding | upstream | 79944 | 57817160 ~ 57817230 (+) |
| LOC118938626 | NA | coding | upstream | 81665 | 57815439 ~ 57815509 (+) |
| LOC110512521 | LOC106606521 | coding | downstream | 151218 | 58049362 ~ 58052530 (+) |
| LOC110486927 | LOC106606522 | coding | downstream | 156881 | 58055025 ~ 58058043 (+) |
| LOC110485250 | LOC106606520 | coding | downstream | 185118 | 58083262 ~ 58110194 (+) |
| LOC110486938 | LOC106611499 | coding | downstream | 233141 | 58131285 ~ 58195479 (+) |
| LOC110486945 | fa10 | coding | downstream | 388114 | 58286258 ~ 58295388 (+) |
| G1190535 | NA | non-coding | upstream | 2144 | 57894731 ~ 57895030 (+) |
| G1190533 | NA | non-coding | upstream | 8434 | 57888281 ~ 57888740 (+) |
| G1190499 | NA | non-coding | upstream | 127247 | 57769581 ~ 57769927 (+) |
| G1190093 | NA | non-coding | upstream | 132669 | 57764243 ~ 57764505 (+) |
| G1190085 | NA | non-coding | upstream | 150772 | 57744825 ~ 57746402 (+) |
| G1190536 | NA | non-coding | downstream | 142 | 57898286 ~ 57899134 (+) |
| G1190543 | NA | non-coding | downstream | 7301 | 57905445 ~ 57905669 (+) |
| G1190544 | NA | non-coding | downstream | 8015 | 57906159 ~ 57906387 (+) |
| G1190568 | NA | non-coding | downstream | 52350 | 57950494 ~ 57994502 (+) |
| G1190550 | NA | non-coding | downstream | 71655 | 57969799 ~ 58000260 (+) |
| LOC110514101 | LOC106606600 | other | upstream | 256616 | 57522756 ~ 57640558 (+) |
| LOC110486909 | LOC106601794 | other | upstream | 271769 | 57613961 ~ 57625405 (+) |
| G1189819 | NA | other | upstream | 841557 | 57054453 ~ 57055617 (+) |
| G1189675 | srebf1 | other | upstream | 971567 | 56877928 ~ 56925607 (+) |
| G1189738 | NA | other | upstream | 1060178 | 56836416 ~ 56836996 (+) |
| G1190689 | NA | other | downstream | 142742 | 58040886 ~ 58041295 (+) |
| LOC110538555 | NA | other | downstream | 638683 | 58521363 ~ 58557066 (+) |
| G1191444 | NA | other | downstream | 1369927 | 59268071 ~ 59270262 (+) |
| G1191529 | LOC106601890 | other | downstream | 1488028 | 59381313 ~ 59388776 (+) |
