G1190543


Basic Information

Item Value
gene id G1190543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 57905445 ~ 57905669 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1357952
AGGTAAAAGTAGTCCTTAACCCCAGATCTAGGACCAGATCAGCCTACTCCTGATCCTAACCTAAATGATTATAGGCAGTGATGTAAAGTACACTaagtgaccaaaagtatgtggacacctgctcactgaacatctcattccaaaatcatgcgcattgatatggagttggtcccccctttgctgctataacagcctccactcttctgggaaggctctccactagat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1357952 True 225 lncRNA 0.45 1 57905445 57905669

Neighbor

gene id symbol gene type direction distance location
LOC110486929 LOC106592861 coding upstream 47451 57847447 ~ 57857994 (+)
LOC110486928 LOC106606535 coding upstream 59737 57838961 ~ 57845708 (+)
LOC118938625 NA coding upstream 84614 57820761 ~ 57820831 (+)
LOC118938623 NA coding upstream 88215 57817160 ~ 57817230 (+)
LOC118938626 NA coding upstream 89936 57815439 ~ 57815509 (+)
LOC110512521 LOC106606521 coding downstream 143693 58049362 ~ 58052530 (+)
LOC110486927 LOC106606522 coding downstream 149356 58055025 ~ 58058043 (+)
LOC110485250 LOC106606520 coding downstream 177593 58083262 ~ 58110194 (+)
LOC110486938 LOC106611499 coding downstream 225616 58131285 ~ 58195479 (+)
LOC110486945 fa10 coding downstream 380589 58286258 ~ 58295388 (+)
G1190536 NA non-coding upstream 6311 57898286 ~ 57899134 (+)
G1190538 NA non-coding upstream 7301 57897174 ~ 57898144 (+)
G1190535 NA non-coding upstream 10415 57894731 ~ 57895030 (+)
G1190533 NA non-coding upstream 16705 57888281 ~ 57888740 (+)
G1190499 NA non-coding upstream 135518 57769581 ~ 57769927 (+)
G1190544 NA non-coding downstream 490 57906159 ~ 57906387 (+)
G1190568 NA non-coding downstream 44825 57950494 ~ 57994502 (+)
G1190550 NA non-coding downstream 64130 57969799 ~ 58000260 (+)
G1190574 NA non-coding downstream 71467 57977136 ~ 57990874 (+)
G1190670 NA non-coding downstream 100394 58006063 ~ 58009089 (+)
LOC110514101 LOC106606600 other upstream 264887 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other upstream 280040 57613961 ~ 57625405 (+)
G1189819 NA other upstream 849828 57054453 ~ 57055617 (+)
G1189675 srebf1 other upstream 979838 56877928 ~ 56925607 (+)
G1189738 NA other upstream 1068449 56836416 ~ 56836996 (+)
G1190689 NA other downstream 135217 58040886 ~ 58041295 (+)
LOC110538555 NA other downstream 631158 58521363 ~ 58557066 (+)
G1191444 NA other downstream 1362402 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 1480503 59381313 ~ 59388776 (+)

Expression


Co-expression Network