G1190798


Basic Information

Item Value
gene id G1190798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58149888 ~ 58150270 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1358294
gtggatcatagtgaatgtgttttgcctctgtggatcatagtgaatgtgttttgcctctgtggatcatagtgaatgtgttttgcttctgtggatcatagtgaatgtgttttgcctctgtggatcatagtgaatgttttgcctctgtggatcatagtgaatgttttttgcctctgtggatcatagtgaatgtgttttgcctctgtggatcatagtgaatgtgttttgcctctgtggatcataGTGAAGGTTTTTCCCTCtgtggatcatagtgaatgtTTTTTCCCTCtgtggatcatagtgaatgttttttgcctctgtggatcatagtgaatgtgttttgcctctgtggatcatagtgaatgtgttttgcctctgtggatcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1358294 True 383 lncRNA 0.40 1 58149888 58150270

Neighbor

gene id symbol gene type direction distance location
LOC110485250 LOC106606520 coding upstream 39694 58083262 ~ 58110194 (+)
LOC110486927 LOC106606522 coding upstream 91845 58055025 ~ 58058043 (+)
LOC110512521 LOC106606521 coding upstream 97358 58049362 ~ 58052530 (+)
LOC110486929 LOC106592861 coding upstream 291894 57847447 ~ 57857994 (+)
LOC110486928 LOC106606535 coding upstream 304180 57838961 ~ 57845708 (+)
LOC110486945 fa10 coding downstream 135988 58286258 ~ 58295388 (+)
LOC110514297 gprc5b coding downstream 162486 58312756 ~ 58347543 (+)
LOC118938097 NA coding downstream 198260 58348530 ~ 58349263 (+)
LOC110486947 LOC106601860 coding downstream 278102 58428372 ~ 58446189 (+)
LOC110538555 NA coding downstream 371093 58521363 ~ 58557066 (+)
G1190719 NA non-coding upstream 57198 58092044 ~ 58092690 (+)
G1190690 NA non-coding upstream 107469 58042155 ~ 58042419 (+)
G1190679 NA non-coding upstream 135855 58011720 ~ 58014033 (+)
G1190673 NA non-coding upstream 140326 58009308 ~ 58009562 (+)
G1190670 NA non-coding upstream 140799 58006063 ~ 58009089 (+)
G1190800 NA non-coding downstream 8625 58158895 ~ 58159125 (+)
G1190832 NA non-coding downstream 47703 58197973 ~ 58198262 (+)
G1190842 NA non-coding downstream 70875 58221145 ~ 58221381 (+)
G1190843 NA non-coding downstream 71434 58221704 ~ 58222020 (+)
G1190844 NA non-coding downstream 72399 58222669 ~ 58222875 (+)
G1190689 NA other upstream 108593 58040886 ~ 58041295 (+)
G1190568 NA other upstream 155386 57950494 ~ 57994502 (+)
LOC110514101 LOC106606600 other upstream 509330 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other upstream 524483 57613961 ~ 57625405 (+)
G1189819 NA other upstream 1094271 57054453 ~ 57055617 (+)
G1191444 NA other downstream 1117801 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 1235902 59381313 ~ 59388776 (+)
G1191622 NA other downstream 1475565 59625835 ~ 59626661 (+)
LOC110486998 LOC106606498 other downstream 1762828 59912124 ~ 59920162 (+)

Expression


Co-expression Network