G1190832


Basic Information

Item Value
gene id G1190832
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58197973 ~ 58198262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1358336
ctTATATCTCTGGTATTGCAGACAGCCAcatattttacagaaatactcataaatgtcgatgaaaattcaagtgttagacatggaaatatagatatacctctcctatatgcaaccgctgtgtcagattttttttaaacttttttaaaaagcaaaccatgcaataatctgagatggcGCTCAGAAAACAAATAAAGTTTTCCgtcatgttggagtcaacagaaatcagaaattacataaatattcccttacctttgatgatcttcatcagattgcagtcccaggaatcacag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1358336 True 290 lncRNA 0.34 1 58197973 58198262

Neighbor

gene id symbol gene type direction distance location
LOC110486938 LOC106611499 coding upstream 2494 58131285 ~ 58195479 (+)
LOC110485250 LOC106606520 coding upstream 87779 58083262 ~ 58110194 (+)
LOC110486927 LOC106606522 coding upstream 139930 58055025 ~ 58058043 (+)
LOC110512521 LOC106606521 coding upstream 145443 58049362 ~ 58052530 (+)
LOC110486929 LOC106592861 coding upstream 339979 57847447 ~ 57857994 (+)
LOC110486945 fa10 coding downstream 87996 58286258 ~ 58295388 (+)
LOC110514297 gprc5b coding downstream 114494 58312756 ~ 58347543 (+)
LOC118938097 NA coding downstream 150268 58348530 ~ 58349263 (+)
LOC110486947 LOC106601860 coding downstream 230110 58428372 ~ 58446189 (+)
LOC110538555 NA coding downstream 323101 58521363 ~ 58557066 (+)
G1190800 NA non-coding upstream 38848 58158895 ~ 58159125 (+)
G1190798 NA non-coding upstream 47703 58149888 ~ 58150270 (+)
G1190719 NA non-coding upstream 105283 58092044 ~ 58092690 (+)
G1190690 NA non-coding upstream 155554 58042155 ~ 58042419 (+)
G1190679 NA non-coding upstream 183940 58011720 ~ 58014033 (+)
G1190842 NA non-coding downstream 22883 58221145 ~ 58221381 (+)
G1190843 NA non-coding downstream 23442 58221704 ~ 58222020 (+)
G1190844 NA non-coding downstream 24407 58222669 ~ 58222875 (+)
G1190847 NA non-coding downstream 26210 58224472 ~ 58224717 (+)
G1190860 NA non-coding downstream 66387 58264649 ~ 58266682 (+)
G1190689 NA other upstream 156678 58040886 ~ 58041295 (+)
G1190568 NA other upstream 203471 57950494 ~ 57994502 (+)
LOC110514101 LOC106606600 other upstream 557415 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other upstream 572568 57613961 ~ 57625405 (+)
G1189819 NA other upstream 1142356 57054453 ~ 57055617 (+)
G1191444 NA other downstream 1069809 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 1187910 59381313 ~ 59388776 (+)
G1191622 NA other downstream 1427573 59625835 ~ 59626661 (+)
LOC110486998 LOC106606498 other downstream 1714836 59912124 ~ 59920162 (+)

Expression


Co-expression Network