G1190847


Basic Information

Item Value
gene id G1190847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58224472 ~ 58224717 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1358351
ccatgctggtcatttatgaacatttgaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttgtcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1358351 True 246 lncRNA 0.49 1 58224472 58224717

Neighbor

gene id symbol gene type direction distance location
LOC110486938 LOC106611499 coding upstream 28993 58131285 ~ 58195479 (+)
LOC110485250 LOC106606520 coding upstream 114278 58083262 ~ 58110194 (+)
LOC110486927 LOC106606522 coding upstream 166429 58055025 ~ 58058043 (+)
LOC110512521 LOC106606521 coding upstream 171942 58049362 ~ 58052530 (+)
LOC110486929 LOC106592861 coding upstream 366478 57847447 ~ 57857994 (+)
LOC110486945 fa10 coding downstream 61541 58286258 ~ 58295388 (+)
LOC110514297 gprc5b coding downstream 88039 58312756 ~ 58347543 (+)
LOC118938097 NA coding downstream 123813 58348530 ~ 58349263 (+)
LOC110486947 LOC106601860 coding downstream 203655 58428372 ~ 58446189 (+)
LOC110538555 NA coding downstream 296646 58521363 ~ 58557066 (+)
G1190844 NA non-coding upstream 1597 58222669 ~ 58222875 (+)
G1190843 NA non-coding upstream 2452 58221704 ~ 58222020 (+)
G1190842 NA non-coding upstream 3091 58221145 ~ 58221381 (+)
G1190832 NA non-coding upstream 26210 58197973 ~ 58198262 (+)
G1190800 NA non-coding upstream 65347 58158895 ~ 58159125 (+)
G1190860 NA non-coding downstream 39932 58264649 ~ 58266682 (+)
G1190879 NA non-coding downstream 52960 58277677 ~ 58279594 (+)
G1190897 NA non-coding downstream 94201 58318918 ~ 58319623 (+)
G1190898 NA non-coding downstream 95491 58320208 ~ 58321158 (+)
G1190906 NA non-coding downstream 108966 58333683 ~ 58334215 (+)
G1190689 NA other upstream 183177 58040886 ~ 58041295 (+)
G1190568 NA other upstream 229970 57950494 ~ 57994502 (+)
LOC110514101 LOC106606600 other upstream 583914 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other upstream 599067 57613961 ~ 57625405 (+)
G1189819 NA other upstream 1168855 57054453 ~ 57055617 (+)
G1191444 NA other downstream 1043354 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 1161455 59381313 ~ 59388776 (+)
G1191622 NA other downstream 1401118 59625835 ~ 59626661 (+)
LOC110486998 LOC106606498 other downstream 1688381 59912124 ~ 59920162 (+)

Expression


Co-expression Network