G1190860


Basic Information

Item Value
gene id G1190860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58264649 ~ 58266682 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1358376
gtatacatacactaaactccctgactacgtacagtatacacacaccaaactccctgacaacatacagtatacatacaccaaACTCcctgacaacatacagtatacatacaccaaACTCcctgacaacatacagtatacatacactaaactccctgacaacatacagtatacacacaccaaactccctgactacatacagtatacacacaccaaactccctgaccacatacagtatacatacactaaactccctgactacatacagtatacatac
>TU1358378
gtatacatacactaaactccctgactacgtacagtatacacacaccaaactccctgacaacatacagtatacatacaccaaACTCcctgacaacatacagtatacatacaccaaACTCcctgacaacatacagtatacatacacaaaactccctgactacatacagtatacatacaccaaACTCcctgacaacatacagtatacatacacaaaACTCCCTGACTacgtacagtatacacacaccaaactccctgacaacatacagtatacatacaccaaACTCcctgacaacatacagtatacatacactaaactccctgactacatacagtatacacacaccaaactccctgactacatacagtatacatacactaaactccctgactacatacagtatacatacaccaaactccctgactacatacagtatacatacaccaaactccctgactacatacagtatacatacactaaactccctgactacatacagtatacatacaccaaactccctgactacatacagtatacacacaccaaactccctgactacatacagtatacacacaccaaactccctgaccacatacagtatacatacactaaactccctgactacatacagtatacatac

Function

NR:

description
PREDICTED: early nodulin-75-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1358376 False 274 lncRNA 0.40 2 58264649 58266682
TU1358378 True 637 lncRNA 0.39 4 58264649 58266682

Neighbor

gene id symbol gene type direction distance location
LOC110486938 LOC106611499 coding upstream 69170 58131285 ~ 58195479 (+)
LOC110485250 LOC106606520 coding upstream 154455 58083262 ~ 58110194 (+)
LOC110486927 LOC106606522 coding upstream 206606 58055025 ~ 58058043 (+)
LOC110512521 LOC106606521 coding upstream 212119 58049362 ~ 58052530 (+)
LOC110486929 LOC106592861 coding upstream 406655 57847447 ~ 57857994 (+)
LOC110486945 fa10 coding downstream 19576 58286258 ~ 58295388 (+)
LOC110514297 gprc5b coding downstream 46074 58312756 ~ 58347543 (+)
LOC118938097 NA coding downstream 81848 58348530 ~ 58349263 (+)
LOC110486947 LOC106601860 coding downstream 161690 58428372 ~ 58446189 (+)
LOC110538555 NA coding downstream 254681 58521363 ~ 58557066 (+)
G1190847 NA non-coding upstream 39932 58224472 ~ 58224717 (+)
G1190844 NA non-coding upstream 41774 58222669 ~ 58222875 (+)
G1190843 NA non-coding upstream 42629 58221704 ~ 58222020 (+)
G1190842 NA non-coding upstream 43268 58221145 ~ 58221381 (+)
G1190832 NA non-coding upstream 66387 58197973 ~ 58198262 (+)
G1190879 NA non-coding downstream 10995 58277677 ~ 58279594 (+)
G1190897 NA non-coding downstream 52236 58318918 ~ 58319623 (+)
G1190898 NA non-coding downstream 53526 58320208 ~ 58321158 (+)
G1190906 NA non-coding downstream 67001 58333683 ~ 58334215 (+)
G1190689 NA other upstream 223354 58040886 ~ 58041295 (+)
G1190568 NA other upstream 270147 57950494 ~ 57994502 (+)
LOC110514101 LOC106606600 other upstream 624091 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other upstream 639244 57613961 ~ 57625405 (+)
G1189819 NA other upstream 1209032 57054453 ~ 57055617 (+)
G1191444 NA other downstream 1001389 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 1119490 59381313 ~ 59388776 (+)
G1191622 NA other downstream 1359153 59625835 ~ 59626661 (+)
LOC110486998 LOC106606498 other downstream 1646416 59912124 ~ 59920162 (+)

Expression


Co-expression Network