Gene
RNA
| Item | Value |
|---|---|
| gene id | G1190897 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 58318918 ~ 58319623 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1358424 | False | 438 | lncRNA | 0.43 | 2 | 58318918 | 58319623 |
| TU1358428 | True | 394 | lncRNA | 0.42 | 3 | 58318918 | 58319623 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486945 | fa10 | coding | upstream | 23530 | 58286258 ~ 58295388 (+) |
| LOC110486938 | LOC106611499 | coding | upstream | 123439 | 58131285 ~ 58195479 (+) |
| LOC110485250 | LOC106606520 | coding | upstream | 208724 | 58083262 ~ 58110194 (+) |
| LOC110486927 | LOC106606522 | coding | upstream | 260875 | 58055025 ~ 58058043 (+) |
| LOC110512521 | LOC106606521 | coding | upstream | 266388 | 58049362 ~ 58052530 (+) |
| LOC118938097 | NA | coding | downstream | 28907 | 58348530 ~ 58349263 (+) |
| LOC110486947 | LOC106601860 | coding | downstream | 108749 | 58428372 ~ 58446189 (+) |
| LOC110538555 | NA | coding | downstream | 201740 | 58521363 ~ 58557066 (+) |
| LOC110518424 | LOC106606554 | coding | downstream | 410068 | 58729691 ~ 58762694 (+) |
| LOC110487024 | LOC106606483 | coding | downstream | 820447 | 59140048 ~ 59251086 (+) |
| G1190879 | NA | non-coding | upstream | 39324 | 58277677 ~ 58279594 (+) |
| G1190860 | NA | non-coding | upstream | 52236 | 58264649 ~ 58266682 (+) |
| G1190847 | NA | non-coding | upstream | 94201 | 58224472 ~ 58224717 (+) |
| G1190844 | NA | non-coding | upstream | 96043 | 58222669 ~ 58222875 (+) |
| G1190843 | NA | non-coding | upstream | 96898 | 58221704 ~ 58222020 (+) |
| G1190898 | NA | non-coding | downstream | 585 | 58320208 ~ 58321158 (+) |
| G1190906 | NA | non-coding | downstream | 14060 | 58333683 ~ 58334215 (+) |
| LOC110514297 | gprc5b | non-coding | downstream | 24414 | 58312756 ~ 58347543 (+) |
| G1190907 | NA | non-coding | downstream | 28527 | 58348150 ~ 58348501 (+) |
| G1190908 | NA | non-coding | downstream | 30977 | 58350600 ~ 58351505 (+) |
| G1190689 | NA | other | upstream | 277623 | 58040886 ~ 58041295 (+) |
| G1190568 | NA | other | upstream | 324416 | 57950494 ~ 57994502 (+) |
| LOC110514101 | LOC106606600 | other | upstream | 678360 | 57522756 ~ 57640558 (+) |
| LOC110486909 | LOC106601794 | other | upstream | 693513 | 57613961 ~ 57625405 (+) |
| G1189819 | NA | other | upstream | 1263301 | 57054453 ~ 57055617 (+) |
| G1191444 | NA | other | downstream | 948448 | 59268071 ~ 59270262 (+) |
| G1191529 | LOC106601890 | other | downstream | 1066549 | 59381313 ~ 59388776 (+) |
| G1191622 | NA | other | downstream | 1306212 | 59625835 ~ 59626661 (+) |
| LOC110486998 | LOC106606498 | other | downstream | 1593475 | 59912124 ~ 59920162 (+) |
