G1190906


Basic Information

Item Value
gene id G1190906
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58333683 ~ 58334215 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1358438
ggataggatgggataggataggatgggataggataggatagggtgggataggataggataggatgggataggataggatagggtgggataggataggatagggtaggatgggataggatgggataggataggatagggtgggataggataggataggatgggataggataggataggatgggataggataggataggatagggtaggatgggatagggtaggatgggatagggtaggatgggataggataggatgggatagggtaggatgggataggataggatgggataggataggatgggataggatgggatagggtaggatgggatagggtaggatgggataggatgggataggatgggatagggtaggatgggatagggtaggatgggatagggtaggatgggata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1358438 True 410 lncRNA 0.49 2 58333683 58334215

Neighbor

gene id symbol gene type direction distance location
LOC110486945 fa10 coding upstream 38295 58286258 ~ 58295388 (+)
LOC110486938 LOC106611499 coding upstream 138204 58131285 ~ 58195479 (+)
LOC110485250 LOC106606520 coding upstream 223489 58083262 ~ 58110194 (+)
LOC110486927 LOC106606522 coding upstream 275640 58055025 ~ 58058043 (+)
LOC110512521 LOC106606521 coding upstream 281153 58049362 ~ 58052530 (+)
LOC118938097 NA coding downstream 14315 58348530 ~ 58349263 (+)
LOC110486947 LOC106601860 coding downstream 94157 58428372 ~ 58446189 (+)
LOC110538555 NA coding downstream 187148 58521363 ~ 58557066 (+)
LOC110518424 LOC106606554 coding downstream 395476 58729691 ~ 58762694 (+)
LOC110487024 LOC106606483 coding downstream 805855 59140048 ~ 59251086 (+)
G1190898 NA non-coding upstream 12525 58320208 ~ 58321158 (+)
G1190897 NA non-coding upstream 14060 58318918 ~ 58319623 (+)
G1190879 NA non-coding upstream 54089 58277677 ~ 58279594 (+)
G1190860 NA non-coding upstream 67001 58264649 ~ 58266682 (+)
G1190847 NA non-coding upstream 108966 58224472 ~ 58224717 (+)
LOC110514297 gprc5b non-coding downstream 9822 58312756 ~ 58347543 (+)
G1190907 NA non-coding downstream 13935 58348150 ~ 58348501 (+)
G1190908 NA non-coding downstream 16385 58350600 ~ 58351505 (+)
G1190965 NA non-coding downstream 37666 58371881 ~ 58372099 (+)
G1190978 NA non-coding downstream 57961 58392176 ~ 58392533 (+)
G1190689 NA other upstream 292388 58040886 ~ 58041295 (+)
G1190568 NA other upstream 339181 57950494 ~ 57994502 (+)
LOC110514101 LOC106606600 other upstream 693125 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other upstream 708278 57613961 ~ 57625405 (+)
G1189819 NA other upstream 1278066 57054453 ~ 57055617 (+)
G1191444 NA other downstream 933856 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 1051957 59381313 ~ 59388776 (+)
G1191622 NA other downstream 1291620 59625835 ~ 59626661 (+)
LOC110486998 LOC106606498 other downstream 1578883 59912124 ~ 59920162 (+)

Expression


Co-expression Network