G1190990


Basic Information

Item Value
gene id G1190990
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58417904 ~ 58418192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1358557
AttcagagggagagaacagtgtgTGACTGACATGAGACATACCATGAGAGGAAACACAGGAAGCAAAGGAAACACCAAGCTAAGGGAGAGTTAGTCCAAACTAAGATAACTACAAAGGCGCTATGCTACCATTTTCATTGTGTTATTCCCTCATAACACACAGTCTTACACACAGAAATGCTGAACCACAAGCGCACACACTGACAGAATCATCGGGCTGAATCATCGAAACCACAACCACAGCGGTTGCTCGTGTGAGCAACTCTGGAACTCATCAGCAAGAATGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1358557 True 289 lncRNA 0.45 1 58417904 58418192

Neighbor

gene id symbol gene type direction distance location
LOC118938097 NA coding upstream 68641 58348530 ~ 58349263 (+)
LOC110514297 gprc5b coding upstream 70361 58312756 ~ 58347543 (+)
LOC110486945 fa10 coding upstream 122516 58286258 ~ 58295388 (+)
LOC110486938 LOC106611499 coding upstream 222425 58131285 ~ 58195479 (+)
LOC110485250 LOC106606520 coding upstream 307710 58083262 ~ 58110194 (+)
LOC110486947 LOC106601860 coding downstream 10180 58428372 ~ 58446189 (+)
LOC110538555 NA coding downstream 103171 58521363 ~ 58557066 (+)
LOC110518424 LOC106606554 coding downstream 311499 58729691 ~ 58762694 (+)
LOC110487024 LOC106606483 coding downstream 721878 59140048 ~ 59251086 (+)
LOC110487014 LOC106606516 coding downstream 834104 59252296 ~ 59259759 (+)
G1190986 NA non-coding upstream 4738 58412299 ~ 58413166 (+)
G1190985 NA non-coding upstream 7527 58408793 ~ 58410377 (+)
G1190981 NA non-coding upstream 21768 58395927 ~ 58396136 (+)
G1190979 NA non-coding upstream 24343 58393275 ~ 58393561 (+)
G1190978 NA non-coding upstream 25371 58392176 ~ 58392533 (+)
G1190991 NA non-coding downstream 236 58418428 ~ 58418775 (+)
G1190994 NA non-coding downstream 5939 58424131 ~ 58424437 (+)
G1190995 NA non-coding downstream 7321 58425513 ~ 58426058 (+)
G1191008 NA non-coding downstream 30216 58448408 ~ 58511397 (+)
G1191042 NA non-coding downstream 74138 58492330 ~ 58570817 (+)
G1190689 NA other upstream 376609 58040886 ~ 58041295 (+)
G1190568 NA other upstream 423402 57950494 ~ 57994502 (+)
LOC110514101 LOC106606600 other upstream 777346 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other upstream 792499 57613961 ~ 57625405 (+)
G1189819 NA other upstream 1362287 57054453 ~ 57055617 (+)
G1191444 NA other downstream 849879 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 967980 59381313 ~ 59388776 (+)
G1191622 NA other downstream 1207643 59625835 ~ 59626661 (+)
LOC110486998 LOC106606498 other downstream 1494906 59912124 ~ 59920162 (+)

Expression


Co-expression Network