G1190995


Basic Information

Item Value
gene id G1190995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58425513 ~ 58426058 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1358562
TTAGTGCACTGGTCAATAATTACGAAATCAGGAGAAAGAAATAAAGTGCATGCAACCATGGTGGTGGTTGGTCGTGCAGCCTTGATGTgctagctaagtagctagctagcttacgtCATACCTTCTCGTATTCTAACGTTACTTTCTGTTTTCTAAGTACATCACTAGTTGCACGTATAATCCAACACTTATGCATACATTTCGCACGTCTCATATAACAAGTTACTGGTAGTAGACACCACTAGTCTGAATGTGGGACTATTTCTAAAACAGTTCACGTTTACTGTAACTTACACTCGGCGCTGGTAGTCAAATCCACAGGTTGTTGTGAAGATGAACGACGGTCTGTCTGGTTGTTCAGTTATCCACCAAAATCAGTCCAAGGAAGTAAAATGTTGCTACCAAGTCAGTGCATGGCAAGCCTGCCTAAAAAGTAGCTAACGTTCGGTTTGCCCTTTCCCCGACTGGCACAGTAATATTTTCCGCTGCTCAAACTGACATCACATGGAGCAGAGCAATAATTAACCGCGTTTCAAATCACAATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1358562 True 546 lncRNA 0.42 1 58425513 58426058

Neighbor

gene id symbol gene type direction distance location
LOC118938097 NA coding upstream 76250 58348530 ~ 58349263 (+)
LOC110514297 gprc5b coding upstream 77970 58312756 ~ 58347543 (+)
LOC110486945 fa10 coding upstream 130125 58286258 ~ 58295388 (+)
LOC110486938 LOC106611499 coding upstream 230034 58131285 ~ 58195479 (+)
LOC110485250 LOC106606520 coding upstream 315319 58083262 ~ 58110194 (+)
LOC110486947 LOC106601860 coding downstream 2314 58428372 ~ 58446189 (+)
LOC110538555 NA coding downstream 95305 58521363 ~ 58557066 (+)
LOC110518424 LOC106606554 coding downstream 303633 58729691 ~ 58762694 (+)
LOC110487024 LOC106606483 coding downstream 714012 59140048 ~ 59251086 (+)
LOC110487014 LOC106606516 coding downstream 826238 59252296 ~ 59259759 (+)
G1190994 NA non-coding upstream 1076 58424131 ~ 58424437 (+)
G1190991 NA non-coding upstream 6738 58418428 ~ 58418775 (+)
G1190990 NA non-coding upstream 7321 58417904 ~ 58418192 (+)
G1190986 NA non-coding upstream 12347 58412299 ~ 58413166 (+)
G1190985 NA non-coding upstream 15136 58408793 ~ 58410377 (+)
G1191008 NA non-coding downstream 22350 58448408 ~ 58511397 (+)
G1191042 NA non-coding downstream 66272 58492330 ~ 58570817 (+)
G1191041 NA non-coding downstream 147876 58573934 ~ 58575704 (+)
G1191068 NA non-coding downstream 149661 58575719 ~ 58584498 (+)
G1191075 NA non-coding downstream 167973 58594031 ~ 58603609 (+)
G1190689 NA other upstream 384218 58040886 ~ 58041295 (+)
G1190568 NA other upstream 431011 57950494 ~ 57994502 (+)
LOC110514101 LOC106606600 other upstream 784955 57522756 ~ 57640558 (+)
LOC110486909 LOC106601794 other upstream 800108 57613961 ~ 57625405 (+)
G1189819 NA other upstream 1369896 57054453 ~ 57055617 (+)
G1191444 NA other downstream 842013 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 960114 59381313 ~ 59388776 (+)
G1191622 NA other downstream 1199777 59625835 ~ 59626661 (+)
LOC110486998 LOC106606498 other downstream 1487040 59912124 ~ 59920162 (+)

Expression


Co-expression Network