G1191075


Basic Information

Item Value
gene id G1191075
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58594031 ~ 58603609 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1358658
CCGTGAACTGACAATATAAAATGTACTTCATTTTGGTAAGGGAGGCCTAACCAAAAACATTCTCTGATTAAACCACAGATACCACATATGACATTGCACCTGAATTGAGACCTACTGTAAATGCATTCAGAAATGATCACAAAAGTAAATGATTACCGATTCCCACATCTCATCTCTGGCCTTGTTGCAGTCTCCAGTTCCTGGAAGATCCACCAGCACAATGTGTTCCAGAAGATCCTTGGAGTTTGGCATCTTGATGGTCACATACTTCACAAGTGGCCAGTAGTGTATCTGAGATGATTTAGATTGATTCCTATGTATCTTTCTTTTGCTTCGTATGTAGCAGGCGATCTCTGTAGAGAACTTTGTGGCTGTGTCAAATGACAGGATTTTCCTAGTTGATGAGAGAAACTCTGGGATGTCGCTGAATGTCTCTGACTCCAGTGACTTCAGTTCATCAAAGCTTTTCCCGACTGCATCTTCTCCGTACAATGCCTGGATTTTACTGTTCGCCATATTCACCATCCTTTTATCTTTCTCCTCACCATCCATTTCTTTGATTTTCAAAAGTGATTCCAGCTCCTTCTCCCATTCCTCTTTAGAAATGAAGTCAATCTCTGCCACGTAGTTGGAGTCAGTCATATTGGCCTCCACCTGGATGATGACTGATGTGCATGCGCCAACAGTCCCTGAGGGCAGCAAGGTCTTCAcccccaaaatggcattcatcAGTGAGCTCTTACCAGCTCCTGACCTCCCAAATACACCAACAACAACTTTGTCGTCAATGATAGCCTCCAAAGCTGAGATTTTGTTCCTTAAATAACCAATGAAATCCATGTTTGCATATGGAGGTGACACCTTGTCTAGTCTGCTAAGGACTTTTCCAAGGCCCTCTTTGGCCACTTTGATGACAtccatctCGAGGGTAGGTGTTGCTGCAGTTCCCTTTGCTATGGCACAAAGGCGTTTATTACCTTCCCTGCCCTGATCATTTGAAGTAGAGGGGTCATCAGACCCTCTTTTGTGGCCTTGGGTAGGCATGATGTGACACCGTCCGGGGCTTAGAACAACATGAAGTTGCAAATCTCttaaaaatgactgatttgtttcCTTACTCTTATAG

Function

NR:

description
nuclear GTPase SLIP-GC-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1358658 True 1126 lncRNA 0.44 7 58594031 58603609

Neighbor

gene id symbol gene type direction distance location
LOC110538555 NA coding upstream 36965 58521363 ~ 58557066 (+)
LOC110486947 LOC106601860 coding upstream 147842 58428372 ~ 58446189 (+)
LOC118938097 NA coding upstream 244768 58348530 ~ 58349263 (+)
LOC110514297 gprc5b coding upstream 246488 58312756 ~ 58347543 (+)
LOC110486945 fa10 coding upstream 298643 58286258 ~ 58295388 (+)
LOC110518424 LOC106606554 coding downstream 126082 58729691 ~ 58762694 (+)
LOC110487024 LOC106606483 coding downstream 536461 59140048 ~ 59251086 (+)
LOC110487014 LOC106606516 coding downstream 648687 59252296 ~ 59259759 (+)
LOC110487018 LOC106606511 coding downstream 656353 59259962 ~ 59267092 (+)
LOC118938338 LOC106606494 coding downstream 942676 59546285 ~ 59624228 (+)
G1191068 NA non-coding upstream 9533 58575719 ~ 58584498 (+)
G1191041 NA non-coding upstream 18327 58573934 ~ 58575704 (+)
G1191042 NA non-coding upstream 23214 58492330 ~ 58570817 (+)
G1191008 NA non-coding upstream 82634 58448408 ~ 58511397 (+)
G1190995 NA non-coding upstream 167973 58425513 ~ 58426058 (+)
G1191085 NA non-coding downstream 10771 58614380 ~ 58617022 (+)
G1191073 NA non-coding downstream 20907 58624516 ~ 58626046 (+)
G1191091 NA non-coding downstream 27290 58630899 ~ 58645392 (+)
G1191108 NA non-coding downstream 57871 58661480 ~ 58666109 (+)
G1191128 NA non-coding downstream 104293 58707902 ~ 58708108 (+)
G1190689 NA other upstream 552736 58040886 ~ 58041295 (+)
G1190568 NA other upstream 599529 57950494 ~ 57994502 (+)
LOC110514101 LOC106606600 other upstream 953473 57522756 ~ 57640558 (+)
G1191444 NA other downstream 664462 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 782563 59381313 ~ 59388776 (+)
G1191622 NA other downstream 1022226 59625835 ~ 59626661 (+)
LOC110486998 LOC106606498 other downstream 1309489 59912124 ~ 59920162 (+)
LOC110486993 LOC106606421 other downstream 1354645 59958192 ~ 59970372 (+)

Expression


Co-expression Network