G1191340


Basic Information

Item Value
gene id G1191340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 58878553 ~ 58878781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1358994
gtcctaggtgtctcacagtatggacattgtaatttattgccctggccacatctacagtcctcatgtctcttgcagcatgcctaaggcacattcacgcagatgagcagggaccctgggcatctttttttttgtgtttttcagagtcagtagaaaggcctcttttagtgtcctacgttttcataactgtgtcACGGCCGTTAAAAGAACTgtaccaaggtgcagcgtggtg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1358994 True 229 lncRNA 0.47 1 58878553 58878781

Neighbor

gene id symbol gene type direction distance location
LOC110518424 LOC106606554 coding upstream 115859 58729691 ~ 58762694 (+)
LOC110538555 NA coding upstream 321487 58521363 ~ 58557066 (+)
LOC110486947 LOC106601860 coding upstream 432364 58428372 ~ 58446189 (+)
LOC118938097 NA coding upstream 529290 58348530 ~ 58349263 (+)
LOC110514297 gprc5b coding upstream 531010 58312756 ~ 58347543 (+)
LOC110487024 LOC106606483 coding downstream 261289 59140048 ~ 59251086 (+)
LOC110487014 LOC106606516 coding downstream 373515 59252296 ~ 59259759 (+)
LOC110487018 LOC106606511 coding downstream 381181 59259962 ~ 59267092 (+)
LOC118938338 LOC106606494 coding downstream 667504 59546285 ~ 59624228 (+)
LOC110512482 LOC106601886 coding downstream 849470 59728251 ~ 59783709 (+)
G1191325 NA non-coding upstream 22834 58855437 ~ 58855719 (+)
G1191323 NA non-coding upstream 26459 58851809 ~ 58852094 (+)
G1191322 NA non-coding upstream 26889 58851449 ~ 58851664 (+)
G1191309 NA non-coding upstream 77652 58800520 ~ 58800901 (+)
G1191128 NA non-coding upstream 170445 58707902 ~ 58708108 (+)
G1191389 NA non-coding downstream 181552 59060333 ~ 59060828 (+)
G1191411 NA non-coding downstream 239128 59117909 ~ 59118317 (+)
G1191413 NA non-coding downstream 249159 59127940 ~ 59128238 (+)
G1191419 NA non-coding downstream 262855 59141636 ~ 59142132 (+)
G1190689 NA other upstream 837258 58040886 ~ 58041295 (+)
G1190568 NA other upstream 884051 57950494 ~ 57994502 (+)
LOC110514101 LOC106606600 other upstream 1237995 57522756 ~ 57640558 (+)
G1191444 NA other downstream 389290 59268071 ~ 59270262 (+)
G1191529 LOC106601890 other downstream 507391 59381313 ~ 59388776 (+)
G1191622 NA other downstream 747054 59625835 ~ 59626661 (+)
LOC110486998 LOC106606498 other downstream 1034317 59912124 ~ 59920162 (+)
LOC110486993 LOC106606421 other downstream 1079473 59958192 ~ 59970372 (+)

Expression


Co-expression Network