XLOC_030893



Basic Information


Item Value
gene id XLOC_030893
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 13277241 ~ 13306705 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00061956
GGAGTTGCTATGGAAACGAGGCAATGACACTTCACCTGCAAGACAACATAACTTCTCTCATGCTGCTGTTTTCACTGTTTTCAGGAAACCGCCGGACCCCCGGGTGACCTTTGACCCTTAGAGGTCAATATCCACCGAATTCCCAGATGTCAGAGTTCAGAGCCACCGCTCAGGGACTCAGGTTTCATGCAGATCCATGTGGCGCCAGGCCATGCGTATACAGATATACCACCCAGATCCCACACATACCTGCTTTCCCCTCAGCCTACAGGCTCCCTATCAGAGCCGCGATCTGCTGGATCAACAAAAGACGGACGTTTGGTGACGTCACTGATGATCGATCACCGCTGGATCAATAAATGCAAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00061956 True 366 lncRNA 0.51 2 13277241 13306705

Neighbor


gene id symbol gene type direction distance location
XLOC_030892 top3b coding downstream 25334 13211452 ~ 13251907 (-)
XLOC_030891 ppm1f coding downstream 70363 13181029 ~ 13206878 (-)
XLOC_030890 mapk1 coding downstream 110121 13104851 ~ 13167120 (-)
XLOC_030889 ypel1 coding downstream 190625 13037106 ~ 13086616 (-)
XLOC_030888 NA coding downstream 440634 12835526 ~ 12836607 (-)
XLOC_030894 sdf2l1 coding upstream 1826 13308531 ~ 13315726 (-)
XLOC_030895 ube2l3b coding upstream 30802 13337507 ~ 13353905 (-)
XLOC_030896 AL954191.1 coding upstream 226169 13532874 ~ 13532988 (-)
XLOC_030897 si:ch211-230g14.3 coding upstream 256593 13563298 ~ 13564961 (-)
XLOC_030898 purba coding upstream 336462 13643167 ~ 13646054 (-)
XLOC_030881 BX276096.2 non-coding downstream 910916 12366209 ~ 12366325 (-)
XLOC_030880 CR735143.1 non-coding downstream 1084227 12192898 ~ 12193014 (-)
XLOC_030876 castor1 non-coding downstream 1245320 11982364 ~ 12031921 (-)
XLOC_030871 NA non-coding downstream 1613913 11576673 ~ 11663328 (-)
XLOC_030905 CR388049.1 non-coding upstream 938444 14245149 ~ 14245280 (-)
XLOC_030911 NA non-coding upstream 1474137 14780842 ~ 15176098 (-)
XLOC_030912 NA non-coding upstream 1692917 14999622 ~ 14999996 (-)
XLOC_030913 CR936518.1 non-coding upstream 1880118 15186823 ~ 15215784 (-)

Expression



Co-expression Network