Gene
RNA
| Item | Value |
|---|---|
| gene id | G1192929 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 60852765 ~ 60854086 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1360941 | False | 442 | lncRNA | 0.36 | 2 | 60852765 | 60854086 |
| TU1360944 | True | 432 | lncRNA | 0.34 | 3 | 60853095 | 60854086 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486975 | LOC106606457 | coding | upstream | 67049 | 60784142 ~ 60785716 (+) |
| LOC100136292 | LOC100136292 | coding | upstream | 170070 | 60678389 ~ 60682695 (+) |
| LOC110515874 | LOC106601846 | coding | upstream | 394745 | 60431856 ~ 60458629 (+) |
| LOC110486981 | LOC106601855 | coding | upstream | 459745 | 60386921 ~ 60393020 (+) |
| LOC110511221 | cyp2k4 | coding | upstream | 485774 | 60353061 ~ 60366991 (+) |
| LOC110486968 | LOC106606458 | coding | downstream | 15278 | 60869364 ~ 60871544 (+) |
| LOC110514624 | LOC105012866 | coding | downstream | 71357 | 60925443 ~ 61003345 (+) |
| LOC110538832 | NA | coding | downstream | 444775 | 61249492 ~ 61394343 (+) |
| LOC118938098 | NA | coding | downstream | 1090288 | 61944374 ~ 61945360 (+) |
| LOC110487048 | LOC106601931 | coding | downstream | 1174899 | 62028985 ~ 62030505 (+) |
| G1192924 | NA | non-coding | upstream | 6293 | 60846119 ~ 60846472 (+) |
| G1192843 | NA | non-coding | upstream | 182877 | 60669655 ~ 60669888 (+) |
| G1192839 | NA | non-coding | upstream | 193205 | 60659303 ~ 60659560 (+) |
| G1192831 | NA | non-coding | upstream | 198833 | 60653629 ~ 60653932 (+) |
| G1192828 | NA | non-coding | upstream | 200818 | 60651696 ~ 60651947 (+) |
| G1193043 | NA | non-coding | downstream | 35327 | 60889413 ~ 60889645 (+) |
| G1193050 | NA | non-coding | downstream | 62310 | 60916396 ~ 60917571 (+) |
| G1193056 | NA | non-coding | downstream | 96978 | 60951064 ~ 60951296 (+) |
| G1193057 | NA | non-coding | downstream | 99214 | 60953300 ~ 60953655 (+) |
| G1193058 | NA | non-coding | downstream | 110258 | 60964344 ~ 60964596 (+) |
| LOC118938341 | NA | other | upstream | 545803 | 60304345 ~ 60307074 (+) |
| G1191844 | NA | other | upstream | 731625 | 60064762 ~ 60121140 (+) |
| LOC110485258 | LOC106606416 | other | upstream | 814204 | 60020410 ~ 60041199 (+) |
| G1191801 | NA | other | upstream | 890088 | 59962043 ~ 59962677 (+) |
| G1193515 | NA | other | downstream | 668318 | 61522404 ~ 61523070 (+) |
| G1193742 | NA | other | downstream | 934902 | 61788988 ~ 61846023 (+) |
| G1193964 | LOC106606437 | other | downstream | 1264399 | 62118416 ~ 62121427 (+) |
| G1193989 | NA | other | downstream | 1335639 | 62189725 ~ 62191046 (+) |
| LOC110485308 | LOC106601924 | other | downstream | 1746775 | 62569908 ~ 62605641 (+) |
