XLOC_030905 (CR388049.1)



Basic Information


Item Value
gene id XLOC_030905
gene name CR388049.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 14245149 ~ 14245280 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00060083
taatgttttataaccttttgctggcagctagctctctgtaactctcacatggtcgcccactgaagctaagcagggctgtgcctggtcagtacttggatggaagaccacatgtgTTGCTGGAAGTggcgttag

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104556

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00060083 True 132 rRNA 0.49 1 14245149 14245280

Neighbor


gene id symbol gene type direction distance location
XLOC_030904 npffr1l2 coding downstream 6071 14165567 ~ 14239078 (-)
XLOC_030903 figla coding downstream 396853 13839316 ~ 13848296 (-)
XLOC_030902 add2 coding downstream 409593 13781968 ~ 13835556 (-)
XLOC_030901 snrnp27 coding downstream 466423 13767743 ~ 13778726 (-)
XLOC_030900 mxd1 coding downstream 478498 13706959 ~ 13766651 (-)
XLOC_030906 tet3 coding upstream 61195 14306475 ~ 14373662 (-)
XLOC_030907 ap3m2 coding upstream 129828 14375108 ~ 14390445 (-)
XLOC_030908 kat6a coding upstream 149043 14394323 ~ 14443124 (-)
XLOC_030909 si:ch211-244o22.2 coding upstream 232002 14477282 ~ 14522712 (-)
XLOC_030910 sema4c coding upstream 283821 14529101 ~ 14648433 (-)
XLOC_030896 AL954191.1 non-coding downstream 712161 13532874 ~ 13532988 (-)
XLOC_030893 NA non-coding downstream 938444 13277241 ~ 13306705 (-)
XLOC_030888 NA non-coding downstream 1408542 12835526 ~ 12836607 (-)
XLOC_030881 BX276096.2 non-coding downstream 1878824 12366209 ~ 12366325 (-)
XLOC_030880 CR735143.1 non-coding downstream 2052135 12192898 ~ 12193014 (-)
XLOC_030911 NA non-coding upstream 535562 14780842 ~ 15176098 (-)
XLOC_030912 NA non-coding upstream 754342 14999622 ~ 14999996 (-)
XLOC_030913 CR936518.1 non-coding upstream 941543 15186823 ~ 15215784 (-)
XLOC_030915 NA non-coding upstream 1062259 15307539 ~ 15310108 (-)
XLOC_030920 BX649391.1 non-coding upstream 1489245 15734525 ~ 15734580 (-)

Expression



Co-expression Network