Gene
RNA
| Item | Value |
|---|---|
| gene id | G1193604 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 61624905 ~ 61625116 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| leucine-rich repeat extensin-like protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1361710 | True | 212 | lncRNA | 0.55 | 1 | 61624905 | 61625116 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486965 | LOC100135781 | coding | downstream | 74194 | 61546265 ~ 61550711 (-) |
| LOC110538808 | LOC106601873 | coding | downstream | 598654 | 61005929 ~ 61026251 (-) |
| LOC110486976 | LOC106606471 | coding | downstream | 1058971 | 60460043 ~ 60565934 (-) |
| LOC110486979 | LOC106606406 | coding | downstream | 1216185 | 60403617 ~ 60408720 (-) |
| LOC118936527 | LOC106606405 | coding | downstream | 1237944 | 60377853 ~ 60386961 (-) |
| LOC110512085 | LOC106601929 | coding | upstream | 321536 | 61946652 ~ 62016705 (-) |
| LOC110487040 | LOC106606439 | coding | upstream | 394589 | 62019705 ~ 62025559 (-) |
| LOC110487033 | LOC106606440 | coding | upstream | 405560 | 62030676 ~ 62064793 (-) |
| LOC110487041 | LOC105013038 | coding | upstream | 441988 | 62067104 ~ 62098264 (-) |
| LOC110487058 | LOC106606437 | coding | upstream | 495669 | 62118425 ~ 62160094 (-) |
| G1193579 | NA | non-coding | downstream | 29654 | 61595052 ~ 61595251 (-) |
| G1193578 | NA | non-coding | downstream | 32494 | 61592120 ~ 61592411 (-) |
| G1193545 | NA | non-coding | downstream | 67801 | 61556707 ~ 61557104 (-) |
| G1193544 | NA | non-coding | downstream | 69639 | 61554983 ~ 61555266 (-) |
| G1193542 | NA | non-coding | downstream | 71354 | 61552748 ~ 61553551 (-) |
| G1193608 | NA | non-coding | upstream | 3862 | 61628978 ~ 61629321 (-) |
| G1193673 | NA | non-coding | upstream | 71334 | 61696450 ~ 61699599 (-) |
| G1193694 | NA | non-coding | upstream | 101387 | 61726503 ~ 61726926 (-) |
| G1193695 | NA | non-coding | upstream | 103051 | 61728167 ~ 61734268 (-) |
| G1193705 | NA | non-coding | upstream | 130264 | 61755380 ~ 61755676 (-) |
| G1193568 | NA | other | downstream | 39645 | 61584774 ~ 61585260 (-) |
| G1193386 | NA | other | downstream | 347247 | 61275745 ~ 61277658 (-) |
| G1192815 | NA | other | downstream | 982720 | 60641675 ~ 60642185 (-) |
| G1192757 | NA | other | downstream | 1049708 | 60572370 ~ 60575197 (-) |
| G1194074 | NA | other | upstream | 444993 | 62070109 ~ 62070835 (-) |
| LOC118938342 | LOC106606436 | other | upstream | 539019 | 62164135 ~ 62174550 (-) |
| G1194306 | LOC106600182 | other | upstream | 830788 | 62455904 ~ 62499352 (-) |
| LOC118938346 | LOC106606432 | other | upstream | 844802 | 62469918 ~ 62474424 (-) |
