XLOC_030912


Basic Information

Item Value
gene id XLOC_030912
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 14999622 ~ 14999996 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061529
GTGCGAGATCATTATCACAGGTGATTCATCAGTGACATTGGGAGGGAGAACAGGCACCTGGATAAATGAACCAAACGTCAGTTTGCGCCTGCTTGTTCTGTTGAATGCGGATGATCAAATATTTCTGCTGTCCACCTAGATGCTGCAGTACATGATGTGCACAGTATCTGAGCAAAAAAGGTGCACCCAGAGCAAACTGAAAGAGTGACTTTTAAAGTAACTGGCCTTTGGTTTTGATATAAATTTGATATTCTGGGGCTACAGAAGTGTGATATGGGTAAGGTTAAGAACAGATTTGGTGCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061529 True 303 lncRNA 0.43 2 14999622 14999996

Neighbor

gene id symbol gene type direction distance location
XLOC_030910 sema4c coding downstream 351189 14529101 ~ 14648433 (-)
XLOC_030909 si:ch211-244o22.2 coding downstream 476910 14477282 ~ 14522712 (-)
XLOC_030908 kat6a coding downstream 556498 14394323 ~ 14443124 (-)
XLOC_030907 ap3m2 coding downstream 609177 14375108 ~ 14390445 (-)
XLOC_030906 tet3 coding downstream 625960 14306475 ~ 14373662 (-)
XLOC_030913 CR936518.1 coding upstream 186827 15186823 ~ 15215784 (-)
XLOC_030914 gnb1l coding upstream 222015 15222011 ~ 15283509 (-)
XLOC_030915 NA coding upstream 307543 15307539 ~ 15310108 (-)
XLOC_030916 txnrd2.1 coding upstream 311595 15311591 ~ 15350252 (-)
XLOC_030917 taok3a coding upstream 359999 15359995 ~ 15494297 (-)
XLOC_030905 CR388049.1 non-coding downstream 754342 14245149 ~ 14245280 (-)
XLOC_030896 AL954191.1 non-coding downstream 1466634 13532874 ~ 13532988 (-)
XLOC_030893 NA non-coding downstream 1692917 13277241 ~ 13306705 (-)
XLOC_030888 NA non-coding downstream 2163015 12835526 ~ 12836607 (-)
XLOC_030881 BX276096.2 non-coding downstream 2633297 12366209 ~ 12366325 (-)
XLOC_030920 BX649391.1 non-coding upstream 734529 15734525 ~ 15734580 (-)
XLOC_030921 NA non-coding upstream 813779 15813775 ~ 15817557 (-)
XLOC_030926 NA non-coding upstream 1279244 16279240 ~ 16351306 (-)

Expression


Co-expression Network