Gene
RNA
| Item | Value |
|---|---|
| gene id | G1194696 |
| gene name | LOC106601958 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 62963609 ~ 62979131 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: actin, non-muscle 6.2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1363046 | False | 685 | TUCP | 0.54 | 4 | 62963609 | 62979131 |
| TU1363047 | True | 655 | TUCP | 0.54 | 4 | 62976468 | 62979131 |
62,960,000
62,962,000
62,964,000
62,966,000
62,968,000
62,970,000
62,972,000
62,974,000
62,976,000
62,978,000
62,980,000
62,982,000
62,984,000
62,986,000
62,988,000
62,990,000
62,992,000
62,994,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485137 | LOC106606428 | coding | upstream | 107329 | 62850736 ~ 62856280 (+) |
| socs3 | socs3 | coding | upstream | 184856 | 62775224 ~ 62778753 (+) |
| LOC110487087 | cyh1 | coding | upstream | 227894 | 62607624 ~ 62735715 (+) |
| LOC118938347 | NA | coding | upstream | 237038 | 62723924 ~ 62726571 (+) |
| LOC110485308 | LOC106601924 | coding | upstream | 357969 | 62569908 ~ 62605641 (+) |
| LOC118938099 | NA | coding | downstream | 275743 | 63254874 ~ 63307318 (+) |
| hid1a | LOC104925062 | coding | downstream | 330365 | 63309496 ~ 63348219 (+) |
| LOC110487153 | LOC106606395 | coding | downstream | 398057 | 63377188 ~ 63406484 (+) |
| LOC110487432 | LOC106606393 | coding | downstream | 430780 | 63409911 ~ 63418900 (+) |
| fa18b | LOC106602067 | coding | downstream | 442775 | 63421906 ~ 63426370 (+) |
| G1194682 | NA | non-coding | upstream | 5808 | 62957590 ~ 62957801 (+) |
| G1194638 | NA | non-coding | upstream | 65284 | 62897641 ~ 62898325 (+) |
| G1194631 | NA | non-coding | upstream | 67947 | 62891737 ~ 62895662 (+) |
| G1194626 | NA | non-coding | upstream | 77356 | 62886052 ~ 62886253 (+) |
| G1194617 | NA | non-coding | upstream | 86676 | 62876119 ~ 62876933 (+) |
| G1194706 | NA | non-coding | downstream | 26500 | 63005631 ~ 63005955 (+) |
| G1194709 | NA | non-coding | downstream | 43228 | 63022359 ~ 63025764 (+) |
| G1194710 | NA | non-coding | downstream | 44084 | 63023215 ~ 63025887 (+) |
| G1194702 | NA | non-coding | downstream | 50324 | 63029455 ~ 63032073 (+) |
| G1194711 | NA | non-coding | downstream | 53381 | 63032512 ~ 63033811 (+) |
| G1193989 | NA | other | upstream | 772563 | 62189725 ~ 62191046 (+) |
| G1193964 | LOC106606437 | other | upstream | 842182 | 62118416 ~ 62121427 (+) |
| G1193742 | NA | other | upstream | 1117586 | 61788988 ~ 61846023 (+) |
| G1193515 | NA | other | upstream | 1440539 | 61522404 ~ 61523070 (+) |
| G1194739 | NA | other | downstream | 111172 | 63090303 ~ 63091342 (+) |
| G1194741 | LOC106606381 | other | downstream | 124169 | 63103300 ~ 63104094 (+) |
| LOC118936377 | LOC106606343 | other | downstream | 706892 | 63686009 ~ 63692526 (+) |
| LOC110487456 | LOC106593034 | other | downstream | 721640 | 63700749 ~ 63714263 (+) |
| G1195223 | NA | other | downstream | 773817 | 63752948 ~ 63754685 (+) |
