Gene
RNA
| Item | Value |
|---|---|
| gene id | G1194712 |
| gene name | LOC106601916 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 63037184 ~ 63037492 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| BAH and coiled-coil domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1363068 | True | 309 | lncRNA | 0.58 | 1 | 63037184 | 63037492 |
63,034,400
63,034,800
63,035,200
63,035,600
63,036,000
63,036,400
63,036,800
63,037,200
63,037,600
63,038,000
63,038,400
63,038,800
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486092 | LOC106601958 | coding | upstream | 56491 | 62976416 ~ 62980693 (+) |
| LOC110486094 | LOC106601958 | coding | upstream | 69163 | 62963715 ~ 62968021 (+) |
| LOC110485137 | LOC106606428 | coding | upstream | 180904 | 62850736 ~ 62856280 (+) |
| socs3 | socs3 | coding | upstream | 258431 | 62775224 ~ 62778753 (+) |
| LOC118938347 | NA | coding | upstream | 310613 | 62723924 ~ 62726571 (+) |
| LOC118938099 | NA | coding | downstream | 217382 | 63254874 ~ 63307318 (+) |
| hid1a | LOC104925062 | coding | downstream | 272004 | 63309496 ~ 63348219 (+) |
| LOC110487153 | LOC106606395 | coding | downstream | 339696 | 63377188 ~ 63406484 (+) |
| LOC110487432 | LOC106606393 | coding | downstream | 372419 | 63409911 ~ 63418900 (+) |
| fa18b | LOC106602067 | coding | downstream | 384414 | 63421906 ~ 63426370 (+) |
| G1194711 | NA | non-coding | upstream | 3373 | 63032512 ~ 63033811 (+) |
| G1194702 | NA | non-coding | upstream | 5111 | 63029455 ~ 63032073 (+) |
| G1194710 | NA | non-coding | upstream | 11297 | 63023215 ~ 63025887 (+) |
| G1194709 | NA | non-coding | upstream | 11420 | 63022359 ~ 63025764 (+) |
| G1194706 | NA | non-coding | upstream | 31229 | 63005631 ~ 63005955 (+) |
| G1194714 | NA | non-coding | downstream | 2384 | 63039876 ~ 63040089 (+) |
| G1194721 | LOC106595340 | non-coding | downstream | 13246 | 63050738 ~ 63055457 (+) |
| G1194726 | NA | non-coding | downstream | 22349 | 63059841 ~ 63060125 (+) |
| G1194728 | NA | non-coding | downstream | 24360 | 63061852 ~ 63062094 (+) |
| G1194732 | NA | non-coding | downstream | 32229 | 63069721 ~ 63069979 (+) |
| G1194696 | LOC106601958 | other | upstream | 58053 | 62963609 ~ 62979131 (+) |
| LOC110485308 | LOC106601924 | other | upstream | 434437 | 62569908 ~ 62605641 (+) |
| G1193989 | NA | other | upstream | 846138 | 62189725 ~ 62191046 (+) |
| G1193964 | LOC106606437 | other | upstream | 915757 | 62118416 ~ 62121427 (+) |
| G1193742 | NA | other | upstream | 1191161 | 61788988 ~ 61846023 (+) |
| G1194739 | NA | other | downstream | 52811 | 63090303 ~ 63091342 (+) |
| G1194741 | LOC106606381 | other | downstream | 65808 | 63103300 ~ 63104094 (+) |
| LOC118936377 | LOC106606343 | other | downstream | 648531 | 63686009 ~ 63692526 (+) |
| LOC110487456 | LOC106593034 | other | downstream | 663279 | 63700749 ~ 63714263 (+) |
| G1195223 | NA | other | downstream | 715456 | 63752948 ~ 63754685 (+) |
