G1194988



Basic Information


Item Value
gene id G1194988
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 63248672 ~ 63253605 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1363415
cattttgttgcttccagcctatagacagaaactaaaacaggaagctcccgctctcaggtctgttcaatgctggtccgaccaatctgattccacgcttcaagattgcttcgatcacgtggattgggatatgttccgcattgcgtcaaacaacaacattgacaaatacgctgattcggtgagcgagttaatTTGCAAGTGCATTGGcaatgttgtacccacagcaact

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1363415 True 226 lncRNA 0.46 2 63248672 63253605

Neighbor


gene id symbol gene type direction distance location
LOC110486089 LOC106606381 coding downstream 29857 63032412 ~ 63218815 (-)
LOC110487151 LOC105012845 coding downstream 291266 62937168 ~ 62957406 (-)
LOC118938348 LOC106606427 coding downstream 321753 62899607 ~ 62926919 (-)
LOC110487064 lg3bp coding downstream 736243 62506293 ~ 62512429 (-)
LOC118938345 LOC106595712 coding downstream 749482 62495039 ~ 62499190 (-)
LOC110517310 LOC106601910 coding upstream 53576 63307181 ~ 63309144 (-)
LOC110487088 otop2 coding upstream 102880 63356485 ~ 63361782 (-)
LOC110487424 otop2 coding upstream 116087 63369692 ~ 63399197 (-)
LOC110485274 LOC106606392 coding upstream 165744 63419349 ~ 63421498 (-)
LOC110487426 LOC106606390 coding upstream 194890 63448495 ~ 63461634 (-)
G1194987 NA non-coding downstream 7913 63239697 ~ 63240759 (-)
G1194963 NA non-coding downstream 46428 63201627 ~ 63202244 (-)
G1194957 NA non-coding downstream 55992 63190315 ~ 63192680 (-)
G1194949 NA non-coding downstream 69306 63179114 ~ 63179366 (-)
G1194948 NA non-coding downstream 70988 63177360 ~ 63177684 (-)
G1194992 NA non-coding upstream 21396 63275001 ~ 63275221 (-)
G1194993 NA non-coding upstream 27734 63281339 ~ 63281679 (-)
G1195001 NA non-coding upstream 50780 63304385 ~ 63306063 (-)
G1195018 NA non-coding upstream 83336 63336941 ~ 63340383 (-)
G1195021 NA non-coding upstream 91829 63345434 ~ 63346313 (-)
G1194933 NA other downstream 110950 63137040 ~ 63137722 (-)
G1194684 NA other downstream 311599 62935786 ~ 62937073 (-)
G1194521 NA other downstream 512962 62730954 ~ 62735710 (-)
LOC110485277 LOC106602060 other upstream 243493 63495359 ~ 63509387 (-)
G1195624 NA other upstream 691471 63945076 ~ 63945764 (-)
LOC110487482 LOC106606373 other upstream 1081088 64334669 ~ 64362841 (-)
G1195997 NA other upstream 1223365 64476970 ~ 64477372 (-)
G1196113 NA other upstream 1541043 64794648 ~ 64795071 (-)

Expression


G1194988 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
End of interactive chart.

G1194988 Expression in each Bioproject

Bar chart with 20 bars.
G1194988 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network