Gene
RNA
| Item | Value |
|---|---|
| gene id | G1195078 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 63490128 ~ 63529849 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: collagen alpha-1(VIII) chain-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1363545 | True | 1415 | lncRNA | 0.40 | 2 | 63490128 | 63529849 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485275 | LOC106606389 | coding | upstream | 41634 | 63426605 ~ 63448494 (+) |
| fa18b | LOC106602067 | coding | upstream | 63758 | 63421906 ~ 63426370 (+) |
| LOC110487432 | LOC106606393 | coding | upstream | 71228 | 63409911 ~ 63418900 (+) |
| LOC110487153 | LOC106606395 | coding | upstream | 83644 | 63377188 ~ 63406484 (+) |
| hid1a | LOC104925062 | coding | upstream | 141909 | 63309496 ~ 63348219 (+) |
| LOC110487154 | LOC106606388 | coding | downstream | 5170 | 63535019 ~ 63541178 (+) |
| LOC110487431 | LOC106606352 | coding | downstream | 121500 | 63651349 ~ 63667849 (+) |
| LOC110487417 | LOC106606343 | coding | downstream | 142149 | 63671998 ~ 63681018 (+) |
| LOC118936377 | LOC106606343 | coding | downstream | 156160 | 63686009 ~ 63692526 (+) |
| LOC110487418 | LOC106606343 | coding | downstream | 162531 | 63692380 ~ 63695751 (+) |
| G1195074 | NA | non-coding | upstream | 1013 | 63488900 ~ 63489115 (+) |
| G1194873 | NA | non-coding | upstream | 8263 | 63481635 ~ 63481865 (+) |
| G1194872 | NA | non-coding | upstream | 9170 | 63480749 ~ 63480958 (+) |
| G1194871 | NA | non-coding | upstream | 9639 | 63480145 ~ 63480489 (+) |
| G1194870 | NA | non-coding | upstream | 10586 | 63479337 ~ 63479542 (+) |
| G1195098 | NA | non-coding | downstream | 1598 | 63531447 ~ 63531995 (+) |
| G1195123 | NA | non-coding | downstream | 11793 | 63541642 ~ 63542958 (+) |
| G1195122 | NA | non-coding | downstream | 13458 | 63543307 ~ 63547378 (+) |
| G1195127 | NA | non-coding | downstream | 18819 | 63548668 ~ 63548926 (+) |
| G1195128 | NA | non-coding | downstream | 21952 | 63551801 ~ 63552129 (+) |
| G1194741 | LOC106606381 | other | upstream | 386034 | 63103300 ~ 63104094 (+) |
| G1194739 | NA | other | upstream | 398786 | 63090303 ~ 63091342 (+) |
| G1194696 | LOC106601958 | other | upstream | 510997 | 62963609 ~ 62979131 (+) |
| LOC110485308 | LOC106601924 | other | upstream | 887381 | 62569908 ~ 62605641 (+) |
| G1193989 | NA | other | upstream | 1299082 | 62189725 ~ 62191046 (+) |
| LOC110487456 | LOC106593034 | other | downstream | 170922 | 63700749 ~ 63714263 (+) |
| G1195223 | NA | other | downstream | 223099 | 63752948 ~ 63754685 (+) |
| LOC110487419 | dpod1 | other | downstream | 336829 | 63866573 ~ 63903684 (+) |
| G1195428 | NA | other | downstream | 789282 | 64319131 ~ 64332402 (+) |
