Gene
RNA
| Item | Value |
|---|---|
| gene id | G1195625 |
| gene name | LOC103376403 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 63946927 ~ 63947603 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: piggyBac transposable element-derived protein 4-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1364248 | True | 677 | lncRNA | 0.44 | 1 | 63946927 | 63947603 |
63,943,600
63,944,000
63,944,400
63,944,800
63,945,200
63,945,600
63,946,000
63,946,400
63,946,800
63,947,200
63,947,600
63,948,000
63,948,400
63,948,800
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487454 | gys1 | coding | downstream | 83585 | 63838394 ~ 63863342 (-) |
| LOC110487446 | LOC106606413 | coding | downstream | 121558 | 63820224 ~ 63825369 (-) |
| LOC110487429 | LOC106601877 | coding | downstream | 134844 | 63798253 ~ 63812083 (-) |
| LOC118938350 | NA | coding | downstream | 190224 | 63740281 ~ 63763190 (-) |
| LOC110487444 | LOC106601894 | coding | downstream | 225054 | 63714382 ~ 63721873 (-) |
| LOC110487030 | p-ras | coding | upstream | 14873 | 63962476 ~ 63970472 (-) |
| LOC110487029 | LOC105029052 | coding | upstream | 25677 | 63973280 ~ 64040299 (-) |
| slc6a16a | LOC105029051 | coding | upstream | 99371 | 64046974 ~ 64078936 (-) |
| LOC110487478 | LOC106596372 | coding | upstream | 303339 | 64250942 ~ 64252653 (-) |
| LOC110487482 | LOC106606373 | coding | upstream | 387066 | 64334669 ~ 64362841 (-) |
| G1195610 | NA | non-coding | downstream | 36194 | 63910435 ~ 63910733 (-) |
| G1195609 | NA | non-coding | downstream | 36804 | 63909814 ~ 63910123 (-) |
| G1195608 | NA | non-coding | downstream | 37174 | 63909520 ~ 63909753 (-) |
| G1195601 | NA | non-coding | downstream | 45213 | 63900251 ~ 63901714 (-) |
| G1195593 | NA | non-coding | downstream | 53024 | 63893413 ~ 63893903 (-) |
| G1195631 | NA | non-coding | upstream | 30852 | 63978455 ~ 63982273 (-) |
| G1195632 | NA | non-coding | upstream | 53140 | 64000743 ~ 64001124 (-) |
| G1195677 | NA | non-coding | upstream | 172424 | 64120027 ~ 64120258 (-) |
| G1195685 | NA | non-coding | upstream | 198884 | 64146487 ~ 64146932 (-) |
| G1195707 | NA | non-coding | upstream | 275700 | 64223303 ~ 64224101 (-) |
| G1195624 | NA | other | downstream | 1163 | 63945076 ~ 63945764 (-) |
| LOC110485277 | LOC106602060 | other | downstream | 441403 | 63495359 ~ 63509387 (-) |
| G1194933 | NA | other | downstream | 809205 | 63137040 ~ 63137722 (-) |
| LOC110486089 | LOC106606381 | other | downstream | 865354 | 63032412 ~ 63218815 (-) |
| G1194684 | NA | other | downstream | 1009854 | 62935786 ~ 62937073 (-) |
| G1195997 | NA | other | upstream | 529367 | 64476970 ~ 64477372 (-) |
| G1196113 | NA | other | upstream | 847045 | 64794648 ~ 64795071 (-) |
| G1196205 | LOC106606311 | other | upstream | 1004187 | 64951790 ~ 64963785 (-) |
| G1196208 | NA | other | upstream | 1009675 | 64957278 ~ 64961176 (-) |
