G1196205 (LOC106606311)


Basic Information

Item Value
gene id G1196205
gene name LOC106606311
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 64951790 ~ 64963785 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1364983
GGATGTGGCTTTGAATTATGTTACCAGAATGTGTTAGCTAAGGACAACGACTTGTAAGCATAATGACAAAAACATGTTCCCCCAAGAAAAAATAGCTTTTGTATCAAAGTAGAGGATCGTGGCGGGGATGTGGCTACGTTATGGGAAACGTTTTCGGGAGAAAGAGTCGCCCTTCTCGAGTTACAGAACAAGACCGAGCGATTCTGCAACTGAAACAGCAGAGAGATAAACTGAAGCACTACCAGAAGAGAGTCACCCTgcagctggagaaggagaggagtctGGCCAAGCAGCTGCTGAAGGatggaaagaaagaGAAGGCACTGGTTCTTCTCAAGAAGAAGCGTTATCAGGATCAACTGCTAGACAAGACTGAGAACCAGATATCAAACCTGGAACGCATGGTTCAAGACATTGAGTTTGTCCAGATCGAGATGAAAGTCATTGAGGGGCTAAAGGTTGGAAATGACTGTCTGAAGAGTATGCATGAGGCCATGTCACTAGAGGACGTGGAGAGGATCATGGATGAGACCCAGGATGCTATAGAATACCAGAGGCAAATAGATGAGCTGCTGTCAGGCTCCCTGACTCAGGAGGATGAGGATGCTGTGCTATCTGAGCTGGAGGCTATCACTCAGGGAGAAGATGTAGAACTTCCAGAGGTCCCCACTGAGCCTCTACCAGAGGTCCCAGAACCAGCTGAGACCGAGCCAGAGAGAAGACCAGCAAGGAAcaaggagaacagagagatgctGGCAGCGTAGAGACAAGACTCAACAATATCAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAATAACAACAACAGTAGCTGTGGATGTAGCTAGTCCAACTGACTCAACAATATCAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAATAACAGTAGCTGTGGATGTAGCTAGTCCAACTGACTCAATAACAACAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAATAACAGTAGCTGTGGAAGTAGCTAGTCCAACTGACTCAATAACAACAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAATAACAACAACAGTAGCTGTGGATGTAGCTAGTCCAACTGACTCAACAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAACAACAGTAGCTGTGGATGTAGCTAGTCCAACTGACTCAACAATATCAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAATAACAGTAGCTGTGGAAGTAGCTAGTCCAACTGACTCAATAACAACAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAACAACAGTAGCTGTGGATGGAGTTAGTCCAACTgactcaacaacaacaatatcaacaGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAATAACAGCAATACCAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAACAACAATATCAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAATAACAGTAGCAGCTGTGGATGGATCTAGTCCAACTGACTCAATAACAACAACAGTAGCTGTGGATGTAGCTAGTCCAACTGACTCAACAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAACAACAGTAGCTGTGGATGTAGCTAGTCCAACTGACTCAACAATATCAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAATAACAGTAGCTGTGGAAGTAGCTAGTCCAACTGACTCAATAACAACAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAACAACAGTAGCTGTGGATGGAGCTAGTCCAACTGACTCAATAACAGCAATATCAACAGTAGCTATGGATGGAGCTAGTCCAACTgactcaacaacaacaacatcaacagtaGCTATGGATGGAGCTAGTCCAACTGACtcaataacaacaacatcaacagtaGCTATGGATGGAGCTAGTCCAACTGACtcaataacaacaacatcaacagtaGCTATGGATGGAGCTAGTCCAACTGACtcaataacaacaacatcaacagtaGCTATGGATGGAGCTAGTACAACTAACTCAACAACATCAACAGTAGCTATGGAGGGAGCTAGTACAACTAACTCAACAACATCAACAGTAGCTATGGATGGAGCTAGTACAACTGACtcaataacaacaacatcaacagtaGCTATGGAGGGAGCTAGTACAACTAACTCAACAACATCAACAGTAGCTATGGATGGAGCTAGTACAACTGACtcaataacaacaacatcaacagtaGCTATGGAGGGAGCTAGTACAActaactcaacaacaacaacagtagctaTGGATGGAGCTAGTCATCATGCTGGTTGCTCACTGCATGGAGGAGCAGAATCCATCCATCCAGACTCACTCTGCTGGTCTGTCCAGTCCCTGATCCCCCTCTGTCTCATAGAATGGAGTGCAGGTACAGAAGTACACATTCCTCTTCGTAAAAACTTTATTGTCCCAACGCTGAACAATATGATTTGTAGCAAAAACGGGAacaaatgtgtacacacacagatgtgtacaagcagacacacacacaccaccaggc

Function

NR:

description
charged multivesicular body protein 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1364983 True 2619 TUCP 0.45 10 64951790 64963785
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110487480 LOC106606286 coding downstream 6139 64798656 ~ 64945651 (-)
LOC110486630 LOC106601477 coding downstream 276757 64667592 ~ 64675033 (-)
LOC110510722 LOC106606296 coding downstream 289749 64641877 ~ 64662041 (-)
LOC110511879 LOC106606293 coding downstream 296303 64653378 ~ 64655487 (-)
LOC110513424 LOC106606290 coding downstream 311745 64627174 ~ 64640045 (-)
LOC118936529 LOC105012854 coding upstream 5391 64969176 ~ 65045461 (-)
LOC118938357 LOC106595583 coding upstream 524163 65487948 ~ 65503404 (-)
LOC118938101 LOC106603827 coding upstream 1256280 66220065 ~ 66267701 (-)
LOC118938102 LOC106603753 coding upstream 1261365 66225150 ~ 66385923 (-)
LOC118938480 NA coding upstream 1459812 66423597 ~ 66424229 (-)
G1196206 NA non-coding downstream 5213 64945835 ~ 64946577 (-)
G1196157 NA non-coding downstream 20315 64931175 ~ 64931475 (-)
G1196150 NA non-coding downstream 37395 64914019 ~ 64914395 (-)
G1196149 NA non-coding downstream 39351 64909661 ~ 64912439 (-)
G1196147 NA non-coding downstream 43104 64905631 ~ 64908686 (-)
G1196210 NA non-coding upstream 2866 64966651 ~ 64966949 (-)
G1196214 NA non-coding upstream 4101 64967886 ~ 64968303 (-)
G1196224 NA non-coding upstream 31611 64995396 ~ 64995661 (-)
G1196229 NA non-coding upstream 47296 65011081 ~ 65011561 (-)
G1196113 NA other downstream 156719 64794648 ~ 64795071 (-)
G1195997 NA other downstream 474418 64476970 ~ 64477372 (-)
LOC110487482 LOC106606373 other downstream 604383 64334669 ~ 64362841 (-)
G1195624 NA other downstream 1006026 63945076 ~ 63945764 (-)
LOC110485277 LOC106602060 other downstream 1446266 63495359 ~ 63509387 (-)
G1196409 NA other upstream 289494 65253279 ~ 65254078 (-)
G1196536 emp2 other upstream 505662 65446633 ~ 65472652 (-)
G1196797 NA other upstream 826938 65790723 ~ 65795435 (-)
G1196818 NA other upstream 894033 65857818 ~ 65859372 (-)

Expression

G1196205(LOC106606311) Expression in all Baseline Samples

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Co-expression Network