G1196208


Basic Information

Item Value
gene id G1196208
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 64957278 ~ 64961176 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1364987
tgggttctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgcttggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacctactgatgtgtttttacaggttcagtgctgggttctcctatcttaacctactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgctgtgtttttacaggttccgtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgcttggttctcctatcttaacgtactgatgtgtttttacaggttcagtgcttgGTTCTCCTATCTTCACGTACtgctgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgctgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacatactgatgtgtttttacaggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcc
>TU1364989
gtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttccgtgctgggttctcctatcttaatgtactgatgtgtttttacaggtccagtgctgggttctcctatcttaatgtactgatgtgtttttacaggtccagtgctgggttctcctatcttaacgtactgctgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgctgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacatactgatgtgtttttacaggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcc
>TU1364990
gctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggtccagtgctgggttctcctatcttaacgtactgctgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgctgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacatactgatgtgtttttacaggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcc
>TU1364988
gctgggttctcctatcttagcgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgttttttccggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttccgtgctgggttctcctatcttaatgtactgatgtgtttttacaggtccagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggtccagtgctgggttctcctatcttaatgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttcagtgctgggttctcctatcttaacgtactgatgtgtttttacaggttccgtgctgggtt

Function

NR:

description
vegetative cell wall protein gp1-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1364987 False 871 TUCP 0.42 3 64957278 64959397
TU1364989 False 542 TUCP 0.42 2 64957278 64960025
TU1364990 False 348 lncRNA 0.43 3 64957278 64960551
TU1364988 True 536 TUCP 0.42 3 64959488 64961176
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118938356 NA coding downstream 3054 64951543 ~ 64954224 (-)
LOC110487480 LOC106606286 coding downstream 11627 64798656 ~ 64945651 (-)
LOC110486630 LOC106601477 coding downstream 282245 64667592 ~ 64675033 (-)
LOC110510722 LOC106606296 coding downstream 295237 64641877 ~ 64662041 (-)
LOC110511879 LOC106606293 coding downstream 301791 64653378 ~ 64655487 (-)
LOC118936529 LOC105012854 coding upstream 8625 64969176 ~ 65045461 (-)
LOC118938357 LOC106595583 coding upstream 527397 65487948 ~ 65503404 (-)
LOC118938101 LOC106603827 coding upstream 1259514 66220065 ~ 66267701 (-)
LOC118938102 LOC106603753 coding upstream 1264599 66225150 ~ 66385923 (-)
LOC118938480 NA coding upstream 1463046 66423597 ~ 66424229 (-)
G1196206 NA non-coding downstream 10701 64945835 ~ 64946577 (-)
G1196157 NA non-coding downstream 25803 64931175 ~ 64931475 (-)
G1196150 NA non-coding downstream 42883 64914019 ~ 64914395 (-)
G1196149 NA non-coding downstream 44839 64909661 ~ 64912439 (-)
G1196147 NA non-coding downstream 48592 64905631 ~ 64908686 (-)
G1196210 NA non-coding upstream 6100 64966651 ~ 64966949 (-)
G1196214 NA non-coding upstream 7335 64967886 ~ 64968303 (-)
G1196224 NA non-coding upstream 34845 64995396 ~ 64995661 (-)
G1196229 NA non-coding upstream 50530 65011081 ~ 65011561 (-)
G1196113 NA other downstream 162207 64794648 ~ 64795071 (-)
G1195997 NA other downstream 479906 64476970 ~ 64477372 (-)
LOC110487482 LOC106606373 other downstream 609871 64334669 ~ 64362841 (-)
G1195624 NA other downstream 1011514 63945076 ~ 63945764 (-)
LOC110485277 LOC106602060 other downstream 1451754 63495359 ~ 63509387 (-)
G1196409 NA other upstream 292728 65253279 ~ 65254078 (-)
G1196536 emp2 other upstream 508896 65446633 ~ 65472652 (-)
G1196797 NA other upstream 830172 65790723 ~ 65795435 (-)
G1196818 NA other upstream 897267 65857818 ~ 65859372 (-)

Expression

G1196208 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
End of interactive chart.

G1196208 Expression in each Bioproject

Bar chart with 19 bars.
G1196208 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network