G1196229


Basic Information

Item Value
gene id G1196229
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 65011081 ~ 65011561 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1365015
cacatacacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacaagtactctaactaacaattccaaaactactgtcttatacacagtgtaagggtaAGAATATGTACACAGtgtaagaatatgtacataaggatatatgaatgagtgatggtacagagcagcataggcaagatacagtagatggtatcgagtacagtacatacatatgagatgagtatgtaaacaaagtggcatagttaaagtggctagtgatacatgtattacataaggatgcagtcgatgatatagagtacagtatatacgtatgcatatgagattaataatgtagggtaagtaacattatataaggtagcattgtttaaagtggctagtgatatatttacatcatttcccatcaattcccattattaaagtgactggagtTGATTCAGTGTCAAtgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1365015 True 481 lncRNA 0.35 1 65011081 65011561
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110487107 LOC106606311 coding downstream 47258 64952654 ~ 64963823 (-)
LOC118938356 NA coding downstream 56857 64951543 ~ 64954224 (-)
LOC110487480 LOC106606286 coding downstream 65430 64798656 ~ 64945651 (-)
LOC110486630 LOC106601477 coding downstream 336048 64667592 ~ 64675033 (-)
LOC110511879 LOC106606293 coding downstream 355594 64653378 ~ 64655487 (-)
LOC118938357 LOC106595583 coding upstream 476387 65487948 ~ 65503404 (-)
LOC118938101 LOC106603827 coding upstream 1208504 66220065 ~ 66267701 (-)
LOC118938102 LOC106603753 coding upstream 1213589 66225150 ~ 66385923 (-)
LOC118938480 NA coding upstream 1412036 66423597 ~ 66424229 (-)
LOC118938476 LOC106603753 coding upstream 1422828 66434389 ~ 66435647 (-)
G1196224 NA non-coding downstream 15420 64995396 ~ 64995661 (-)
LOC118936529 LOC105012854 non-coding downstream 41046 64969176 ~ 65045461 (-)
G1196214 NA non-coding downstream 42778 64967886 ~ 64968303 (-)
G1196210 NA non-coding downstream 44132 64966651 ~ 64966949 (-)
G1196209 NA non-coding downstream 49724 64960089 ~ 64961357 (-)
G1196232 NA non-coding upstream 3041 65014602 ~ 65015106 (-)
G1196234 NA non-coding upstream 5663 65017224 ~ 65017788 (-)
G1196236 NA non-coding upstream 11178 65022739 ~ 65023187 (-)
G1196239 NA non-coding upstream 17631 65029192 ~ 65030031 (-)
G1196242 NA non-coding upstream 28296 65039857 ~ 65040359 (-)
G1196205 LOC106606311 other downstream 47296 64951790 ~ 64963785 (-)
G1196208 NA other downstream 49905 64957278 ~ 64961176 (-)
G1196113 NA other downstream 216010 64794648 ~ 64795071 (-)
G1195997 NA other downstream 533709 64476970 ~ 64477372 (-)
LOC110487482 LOC106606373 other downstream 663674 64334669 ~ 64362841 (-)
G1196409 NA other upstream 241718 65253279 ~ 65254078 (-)
G1196536 emp2 other upstream 457886 65446633 ~ 65472652 (-)
G1196797 NA other upstream 779162 65790723 ~ 65795435 (-)
G1196818 NA other upstream 846257 65857818 ~ 65859372 (-)

Expression

G1196229 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G1196229 Expression in each Bioproject

Bar chart with 19 bars.
G1196229 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 75.
End of interactive chart.

Co-expression Network