G1196234


Basic Information

Item Value
gene id G1196234
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 65017224 ~ 65017788 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1365020
TAGAAATCAATGaggagggcctcccgggtggcgcagtggttaagggcgctgtactgtactgccagctgtgccatcagagtccctgggttcgtgcccaggctctgtcgtaaccggccgcgaccgggaggtccgtggggcgacgcacaattggcctagcgtcgtccaggttagggagggattggtcggtagggatctccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgcagtgcgcgctagccaaggttgccaggtgcacggtgtagcctccgacacattggtgcggctggcttccgggttggaggtgtgctgtgttaagaagcagtacggctggttgggttgtgtatcggaggacgcatgacattcagccttcgtctctcccgagcccgtacgggagttgtagcgttgagacaagatagtagctactacaacaattggataccacgaaattggggagaaaaaggggtaaaattcaaaaaataaaagAAATCAATGAGGAAGTAGGACAAATAAAGATTTTTTTTGAGGTTGCATGACGTCAATGAAAAAGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1365020 True 565 lncRNA 0.55 1 65017224 65017788
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110487107 LOC106606311 coding downstream 53401 64952654 ~ 64963823 (-)
LOC118938356 NA coding downstream 63000 64951543 ~ 64954224 (-)
LOC110487480 LOC106606286 coding downstream 71573 64798656 ~ 64945651 (-)
LOC110486630 LOC106601477 coding downstream 342191 64667592 ~ 64675033 (-)
LOC110511879 LOC106606293 coding downstream 361737 64653378 ~ 64655487 (-)
LOC118938357 LOC106595583 coding upstream 470160 65487948 ~ 65503404 (-)
LOC118938101 LOC106603827 coding upstream 1202277 66220065 ~ 66267701 (-)
LOC118938102 LOC106603753 coding upstream 1207362 66225150 ~ 66385923 (-)
LOC118938480 NA coding upstream 1405809 66423597 ~ 66424229 (-)
LOC118938476 LOC106603753 coding upstream 1416601 66434389 ~ 66435647 (-)
G1196232 NA non-coding downstream 2118 65014602 ~ 65015106 (-)
G1196229 NA non-coding downstream 5663 65011081 ~ 65011561 (-)
G1196224 NA non-coding downstream 21563 64995396 ~ 64995661 (-)
LOC118936529 LOC105012854 non-coding downstream 47189 64969176 ~ 65045461 (-)
G1196214 NA non-coding downstream 48921 64967886 ~ 64968303 (-)
G1196236 NA non-coding upstream 4951 65022739 ~ 65023187 (-)
G1196239 NA non-coding upstream 11404 65029192 ~ 65030031 (-)
G1196242 NA non-coding upstream 22069 65039857 ~ 65040359 (-)
G1196322 NA non-coding upstream 57938 65075726 ~ 65076056 (-)
G1196311 NA non-coding upstream 83186 65100974 ~ 65106227 (-)
G1196205 LOC106606311 other downstream 53439 64951790 ~ 64963785 (-)
G1196208 NA other downstream 56048 64957278 ~ 64961176 (-)
G1196113 NA other downstream 222153 64794648 ~ 64795071 (-)
G1195997 NA other downstream 539852 64476970 ~ 64477372 (-)
LOC110487482 LOC106606373 other downstream 669817 64334669 ~ 64362841 (-)
G1196409 NA other upstream 235491 65253279 ~ 65254078 (-)
G1196536 emp2 other upstream 451659 65446633 ~ 65472652 (-)
G1196797 NA other upstream 772935 65790723 ~ 65795435 (-)
G1196818 NA other upstream 840030 65857818 ~ 65859372 (-)

Expression

G1196234 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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G1196234 Expression in each Bioproject

Bar chart with 21 bars.
G1196234 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network