Gene
RNA
| Item | Value |
|---|---|
| gene id | G1196239 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 65029192 ~ 65030031 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1365025 | False | 301 | lncRNA | 0.45 | 2 | 65029192 | 65030031 |
| TU1365026 | False | 245 | lncRNA | 0.44 | 2 | 65029192 | 65030031 |
| TU1365027 | True | 245 | lncRNA | 0.44 | 3 | 65029192 | 65030031 |
65,027,200
65,027,600
65,028,000
65,028,400
65,028,800
65,029,200
65,029,600
65,030,000
65,030,400
65,030,800
65,031,200
65,031,600
65,032,000
65,032,400
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487107 | LOC106606311 | coding | downstream | 65369 | 64952654 ~ 64963823 (-) |
| LOC118938356 | NA | coding | downstream | 74968 | 64951543 ~ 64954224 (-) |
| LOC110487480 | LOC106606286 | coding | downstream | 83541 | 64798656 ~ 64945651 (-) |
| LOC110486630 | LOC106601477 | coding | downstream | 354159 | 64667592 ~ 64675033 (-) |
| LOC110511879 | LOC106606293 | coding | downstream | 373705 | 64653378 ~ 64655487 (-) |
| LOC118938357 | LOC106595583 | coding | upstream | 457917 | 65487948 ~ 65503404 (-) |
| LOC118938101 | LOC106603827 | coding | upstream | 1190034 | 66220065 ~ 66267701 (-) |
| LOC118938102 | LOC106603753 | coding | upstream | 1195119 | 66225150 ~ 66385923 (-) |
| LOC118938480 | NA | coding | upstream | 1393566 | 66423597 ~ 66424229 (-) |
| LOC118938476 | LOC106603753 | coding | upstream | 1404358 | 66434389 ~ 66435647 (-) |
| G1196236 | NA | non-coding | downstream | 6005 | 65022739 ~ 65023187 (-) |
| G1196234 | NA | non-coding | downstream | 11404 | 65017224 ~ 65017788 (-) |
| G1196232 | NA | non-coding | downstream | 14086 | 65014602 ~ 65015106 (-) |
| G1196229 | NA | non-coding | downstream | 17631 | 65011081 ~ 65011561 (-) |
| G1196224 | NA | non-coding | downstream | 33531 | 64995396 ~ 64995661 (-) |
| G1196242 | NA | non-coding | upstream | 9826 | 65039857 ~ 65040359 (-) |
| G1196322 | NA | non-coding | upstream | 45695 | 65075726 ~ 65076056 (-) |
| G1196311 | NA | non-coding | upstream | 70943 | 65100974 ~ 65106227 (-) |
| G1196359 | NA | non-coding | upstream | 155372 | 65185403 ~ 65186626 (-) |
| G1196389 | NA | non-coding | upstream | 206636 | 65236667 ~ 65238604 (-) |
| G1196205 | LOC106606311 | other | downstream | 65407 | 64951790 ~ 64963785 (-) |
| G1196208 | NA | other | downstream | 68016 | 64957278 ~ 64961176 (-) |
| G1196113 | NA | other | downstream | 234121 | 64794648 ~ 64795071 (-) |
| G1195997 | NA | other | downstream | 551820 | 64476970 ~ 64477372 (-) |
| LOC110487482 | LOC106606373 | other | downstream | 681785 | 64334669 ~ 64362841 (-) |
| G1196409 | NA | other | upstream | 223248 | 65253279 ~ 65254078 (-) |
| G1196536 | emp2 | other | upstream | 439416 | 65446633 ~ 65472652 (-) |
| G1196797 | NA | other | upstream | 760692 | 65790723 ~ 65795435 (-) |
| G1196818 | NA | other | upstream | 827787 | 65857818 ~ 65859372 (-) |
