G1196389


Basic Information

Item Value
gene id G1196389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 65236667 ~ 65238604 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1365230
cacacaacacagtccaTCAAGATCCTTTTCAAGTACAACACTAGAGACTAGAGAgcactagttagtagtcaaggtgatagactagagaacactagttagtagtcaaggtgatagactggagaacactagttagtagtcaaggtgatacactagagaacactagttagtagtaaaggttatagactagagaacactagttagtagtcaaggttatagactagagaacactagttagtagtaaAGGTTATAGACTCGAGAACACTAGTTTAGTAGTCAAGGTtatagactagagaacactagttagtagtcaaggtgatagactagagaacactagttagtagtcaaggttatagactagagaacactagttagtagtcaaggtgatagactagagaacactagttagtagtcaaggttatagactagagaacactagttagtagtcaaggtgatagactagagaacactagtttagtagtcaaggttatagactagagaacactagttagtagtcaaggttatagactagagaacactagttagtagtcaaggttaCAGACTAGataacactag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1365230 True 573 lncRNA 0.37 2 65236667 65238604
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118936529 LOC105012854 coding downstream 191206 64969176 ~ 65045461 (-)
LOC110487107 LOC106606311 coding downstream 272844 64952654 ~ 64963823 (-)
LOC118938356 NA coding downstream 282443 64951543 ~ 64954224 (-)
LOC110487480 LOC106606286 coding downstream 291016 64798656 ~ 64945651 (-)
LOC110486630 LOC106601477 coding downstream 561634 64667592 ~ 64675033 (-)
LOC118938357 LOC106595583 coding upstream 249344 65487948 ~ 65503404 (-)
LOC118938101 LOC106603827 coding upstream 981461 66220065 ~ 66267701 (-)
LOC118938102 LOC106603753 coding upstream 986546 66225150 ~ 66385923 (-)
LOC118938480 NA coding upstream 1184993 66423597 ~ 66424229 (-)
LOC118938476 LOC106603753 coding upstream 1195785 66434389 ~ 66435647 (-)
G1196359 NA non-coding downstream 50041 65185403 ~ 65186626 (-)
G1196311 NA non-coding downstream 130440 65100974 ~ 65106227 (-)
G1196322 NA non-coding downstream 160611 65075726 ~ 65076056 (-)
G1196242 NA non-coding downstream 196308 65039857 ~ 65040359 (-)
G1196239 NA non-coding downstream 206636 65029192 ~ 65030031 (-)
G1196394 NA non-coding upstream 3988 65242592 ~ 65242847 (-)
G1196397 NA non-coding upstream 6005 65244609 ~ 65244842 (-)
G1196398 NA non-coding upstream 6750 65245354 ~ 65245576 (-)
G1196400 NA non-coding upstream 8096 65246700 ~ 65246937 (-)
G1196402 NA non-coding upstream 8902 65247506 ~ 65247745 (-)
G1196205 LOC106606311 other downstream 272882 64951790 ~ 64963785 (-)
G1196208 NA other downstream 275491 64957278 ~ 64961176 (-)
G1196113 NA other downstream 441596 64794648 ~ 64795071 (-)
G1195997 NA other downstream 759295 64476970 ~ 64477372 (-)
LOC110487482 LOC106606373 other downstream 889260 64334669 ~ 64362841 (-)
G1196409 NA other upstream 14675 65253279 ~ 65254078 (-)
G1196536 emp2 other upstream 230843 65446633 ~ 65472652 (-)
G1196797 NA other upstream 552119 65790723 ~ 65795435 (-)
G1196818 NA other upstream 619214 65857818 ~ 65859372 (-)

Expression

G1196389 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G1196389 Expression in each Bioproject

Bar chart with 4 bars.
G1196389 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 80.
End of interactive chart.

Co-expression Network